RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CXXC4Q9H2H0 198 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 FZR1Q9UM11 496 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CTXND1A0A1B0GTU2 59 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 C16orf97H3BN30 126 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 NDUFB4O95168 129 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CLEC3BP05452 202 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 PPOXP50336 477 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 GFRA1P56159 465 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 HGFACQ04756 655 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 LTC4SQ16873 150 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CXorf67Q86X51 503 aaPredicted RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 MDS2Q8NDY4 140 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 OR5D13Q8NGL4 314 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ST6GALNAC6Q969X2 333 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 TMEM230Q96A57 120 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 RAB37Q96AX2 223 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 RCC1LQ96I51 464 aaKnown RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 HDHD3Q9BSH5 251 aaPredicted RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 PRDM14Q9GZV8 571 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CACNG5Q9UF02 275 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 PPP1R3CQ9UQK1 317 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SELENOKQ9Y6D0 94 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SYNGR2O43760 224 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 UCP2P55851 309 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 CATR1Q13166 79 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 COX19Q49B96 90 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 DNM1P46Q6ZS02 220 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 TBC1D26Q86UD7 250 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 ZIC4Q8N9L1 334 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 DEFB108BQ8NET1 73 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 ZNF837Q96EG3 531 aaPredicted RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 WFDC1Q9HC57 220 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 HEYLQ9NQ87 328 aaPredicted RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 MED12Q93074 2177 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 TMEM238LA0A1B0GVL6 79 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 IGSF23A1L1A6 192 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 FAM90A27PA6NNH2 459 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 CCL25O15444 150 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 OR10J4P0C629 311 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 IL3RAP26951 378 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 OTX1P32242 354 aaPredicted RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 CAMPP49913 170 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 B3GALT5-AS1P59052 145 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 TCF15Q12870 199 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 Q6ZT83 130 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 SSX8Q7RTT4 187 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 MTURNQ8N3F0 131 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 NUDT16L1Q9BRJ7 211 aaKnown RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 REPIN1Q9BWE0 567 aaKnown RBP4.84□□□□□ -1.63
RFFL-202ENST00000394597 NRN1Q9NPD7 142 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 CENPFP49454 3210 aa4.84□□□□□ -1.63
RFFL-202ENST00000394597 A0A1B0GW64 132 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 PRR32B1ATL7 298 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 SYNGR3O43761 229 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 PDE6DO43924 150 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 TMEM50BP56557 158 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 ERVK-16P61578 105 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 C19orf35Q6ZS72 473 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 TCF23Q7RTU1 214 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 TMEM186Q96B77 213 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 COL25A1Q9BXS0 654 aaPredicted RBP4.84□□□□□ -1.64
RFFL-202ENST00000394597 TAAR3PQ9P1P4 343 aa4.84□□□□□ -1.64
RFFL-202ENST00000394597 IGKV3D-15A0A087WSY6 115 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 TEX50A0A1B0GTY4 177 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 S1PR2O95136 353 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 MT-ND6P03923 174 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 EGR1P18146 543 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CFPP27918 469 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 GNG4P50150 75 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 UNC119Q13432 240 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CEACAM21Q3KPI0 293 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CFAP161Q6P656 301 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 DTX1Q86Y01 620 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CALHM1Q8IU99 346 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 Q8NFD4 153 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 OR51G1Q8NGK1 321 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 ZNF524Q96C55 264 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 PROK2Q9HC23 129 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 RFNGQ9Y644 331 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 FREM3P0C091 2139 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CADP27708 2225 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 J3QT63 122 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CCL21O00585 134 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CHEK1O14757 476 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 PPYP01298 95 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 FABP2P12104 132 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SRIP30626 198 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 ADMP35318 185 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 RND2P52198 227 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 GNB2P62879 340 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SRSF6Q13247 344 aaKnown RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 ASCL5Q7RTU5 278 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SPACA3Q8IXA5 215 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 OR8I2Q8N0Y5 310 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 STPG4Q8N801 248 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms