RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 RRHO14718 337 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 TNFSF13O75888 250 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 SSTR5P35346 364 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 PDLIM4P50479 330 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 LINC00310P59036 64 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 QTRT1Q9BXR0 403 aaKnown RBP13.74□□□□□ -0.21
PHTF1-205ENST00000393357 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 ZNF716A6NP11 495 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 M0QZ24 198 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 CCL25O15444 150 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 UMODP07911 640 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 RELBQ01201 579 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 PRR27Q6MZM9 219 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 DMXL2Q8TDJ6 3036 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 FCGR3BO75015 233 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 SRIP30626 198 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 LEAP2Q969E1 77 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 ZNF586Q9NXT0 402 aa13.73□□□□□ -0.21
PHTF1-205ENST00000393357 PINLYPA6NC86 204 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 LTBRP36941 435 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.72□□□□□ -0.21
PHTF1-205ENST00000393357 ATMQ13315 3056 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 PKDREJQ9NTG1 2253 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 LRP5LA4QPB2 252 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 TOX3O15405 576 aaPredicted RBP13.72□□□□□ -0.21
PHTF1-205ENST00000393357 MYOD1P15172 320 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 CD24P25063 80 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 PLP2Q04941 152 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 VAMP3Q15836 100 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 LHFPL4Q7Z7J7 247 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 C17orf82Q86X59 251 aaPredicted RBP13.72□□□□□ -0.21
PHTF1-205ENST00000393357 SEPSECSQ9HD40 501 aaKnown RBP13.72□□□□□ -0.21
PHTF1-205ENST00000393357 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 IL36GQ9NZH8 169 aa13.72□□□□□ -0.21
PHTF1-205ENST00000393357 LRRC30A6NM36 301 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 CFIP05156 583 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 CD1BP29016 333 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 GPR6P46095 362 aaPredicted RBP13.71□□□□□ -0.21
PHTF1-205ENST00000393357 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 FAM216AQ8WUB2 273 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 REPIN1Q9BWE0 567 aaKnown RBP13.71□□□□□ -0.21
PHTF1-205ENST00000393357 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
PHTF1-205ENST00000393357 IGHV3-48P01763 117 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 PSG7Q13046 419 aa13.71□□□□□ -0.21
PHTF1-205ENST00000393357 M0QZK8 103 aa13.71□□□□□ -0.22
PHTF1-205ENST00000393357 TMEM14EPQ6UXP3 125 aa13.71□□□□□ -0.22
PHTF1-205ENST00000393357 MMD2Q8IY49 270 aa13.71□□□□□ -0.22
PHTF1-205ENST00000393357 AGMATQ9BSE5 352 aa13.71□□□□□ -0.22
PHTF1-205ENST00000393357 WIPI2Q9Y4P8 454 aa13.71□□□□□ -0.22
PHTF1-205ENST00000393357 MT-CO3P00414 261 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 CGAP01215 116 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 IL6RP08887 468 aaPredicted RBP13.7□□□□□ -0.22
PHTF1-205ENST00000393357 CAMPP49913 170 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 PQLC2Q6ZP29 291 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 FOXL2NBQ6ZUU3 175 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 ASCL3Q9NQ33 180 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 KCNIP1Q9NZI2 227 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 RPH3ALQ9UNE2 315 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 K7EN84 100 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 PSPNO60542 156 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 CRYBB3P26998 211 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 PRAMEF6Q5VXH4 476 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 LINC00696Q6ZRV3 163 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 GGNQ86UU5 652 aa13.7□□□□□ -0.22
PHTF1-205ENST00000393357 TRAV3A0A0B4J244 114 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 C17orf112F2Z3M2 114 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 CELA3BP08861 270 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 VPS25Q9BRG1 176 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 OBP2BQ9NPH6 170 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 PLXNB1O43157 2135 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 LINC00473A8K010 186 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 CER1O95813 267 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 GNG3P63215 75 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 LAMTOR2Q9Y2Q5 125 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 IGLV3-32A0A0A0MS00 114 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 MOB3BQ86TA1 216 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 LSM10Q969L4 123 aaKnown RBP13.69□□□□□ -0.22
PHTF1-205ENST00000393357 TECTBQ96PL2 329 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 SSBP4Q9BWG4 385 aaPredicted RBP13.69□□□□□ -0.22
PHTF1-205ENST00000393357 C1QTNF5Q9BXJ0 243 aa13.69□□□□□ -0.22
PHTF1-205ENST00000393357 SNAI2O43623 268 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 OR7C2O60412 319 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 LCN2P80188 198 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 MS4A5Q9H3V2 200 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 TECRQ9NZ01 308 aaKnown RBP13.68□□□□□ -0.22
PHTF1-205ENST00000393357 LAMA5O15230 3695 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 IGLV3-12A0A075B6K2 115 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 GJE1A6NN92 205 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 DUSP3P51452 185 aaPredicted RBP13.68□□□□□ -0.22
PHTF1-205ENST00000393357 VHLLQ6RSH7 139 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 GALMQ96C23 342 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 LINC00479Q96M42 142 aa13.68□□□□□ -0.22
PHTF1-205ENST00000393357 CNOT1A5YKK6 2376 aaKnown RBP13.68□□□□□ -0.22
PHTF1-205ENST00000393357 MED13Q9UHV7 2174 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms