RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 GNG10P50151 68 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 SPCS3P61009 180 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 TFF3Q07654 80 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 LRRC75BQ2VPJ9 315 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 LYPD2Q6UXB3 125 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 THNSL2Q86YJ6 484 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 OR4A16Q8NH70 328 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 TMEM231Q9H6L2 316 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 MYO18BQ8IUG5 2567 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 CEBPZOSA8MTT3 80 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 C8orf31Q8N9H6 132 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF383Q8NA42 475 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 PINX1Q96BK5 328 aaKnown RBP16.46■□□□□ 0.23
PTPN11-202ENST00000392597 QTRT1Q9BXR0 403 aaKnown RBP16.46■□□□□ 0.23
PTPN11-202ENST00000392597 CTSZQ9UBR2 303 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 RFNGQ9Y644 331 aa16.46■□□□□ 0.23
PTPN11-202ENST00000392597 A0A1B0GW64 132 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 DVL1O14640 695 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 PEA15Q15121 130 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 POU2AF1Q16633 256 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 ZNF429Q86V71 674 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 ZDHHC16Q969W1 377 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 PBDC1Q9BVG4 233 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 TMEM140Q9NV12 185 aa16.46■□□□□ 0.22
PTPN11-202ENST00000392597 FAM157AC9JC47 383 aa16.45■□□□□ 0.22
PTPN11-202ENST00000392597 SERF2P84101 59 aa16.45■□□□□ 0.22
PTPN11-202ENST00000392597 RELBQ01201 579 aa16.45■□□□□ 0.22
PTPN11-202ENST00000392597 DHRS7BQ6IAN0 325 aaPredicted RBP16.45■□□□□ 0.22
PTPN11-202ENST00000392597 H1FXQ92522 213 aaKnown RBP16.45■□□□□ 0.22
PTPN11-202ENST00000392597 SCRT1Q9BWW7 348 aa16.45■□□□□ 0.22
PTPN11-202ENST00000392597 WDR61Q9GZS3 305 aaKnown RBP16.45■□□□□ 0.22
PTPN11-202ENST00000392597 DOCK11Q5JSL3 2073 aa16.45■□□□□ 0.22
PTPN11-202ENST00000392597 PMS2P5A8MQ11 134 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 IFNA17P01571 189 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 CCL3L1P16619 93 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 TLE4Q04727 773 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 GUK1Q16774 197 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 ZNF833PQ6ZTB9 187 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 SSX9Q7RTT3 188 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 OR10P1Q8NGE3 313 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 TMEM147Q9BVK8 224 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 TRBV23-1A0A0A0MS06 115 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 HRASP01112 189 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 H2AFB1P0C5Y9 115 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 SFTA3P0C7M3 94 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 OR2B8PP59922 312 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 GNB2P62879 340 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 RPP30P78346 268 aaKnown RBP16.44■□□□□ 0.22
PTPN11-202ENST00000392597 BTN1A1Q13410 526 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 OR8G2PQ6IF36 304 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 ATRAIDQ6UW56 229 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 PUSL1Q8N0Z8 303 aaKnown RBP16.44■□□□□ 0.22
PTPN11-202ENST00000392597 ZNF596Q8TC21 504 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 RHOVQ96L33 236 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 CLCC1Q96S66 551 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 NKX6-2Q9C056 277 aaPredicted RBP16.44■□□□□ 0.22
PTPN11-202ENST00000392597 SMDT1Q9H4I9 107 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 FBXO7Q9Y3I1 522 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 TIMM9Q9Y5J7 89 aa16.44■□□□□ 0.22
PTPN11-202ENST00000392597 ARG1P05089 322 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 DLX6P56179 175 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 TAGLNQ01995 201 aaKnown RBP16.43■□□□□ 0.22
PTPN11-202ENST00000392597 RTL8BQ17RB0 113 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 TMEM155Q4W5P6 130 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 SP5Q6BEB4 398 aaPredicted RBP16.43■□□□□ 0.22
PTPN11-202ENST00000392597 FAM71F2Q6NXP2 309 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 CENPVQ7Z7K6 275 aaPredicted RBP16.43■□□□□ 0.22
PTPN11-202ENST00000392597 LINC00311Q8N616 119 aa16.43■□□□□ 0.22
PTPN11-202ENST00000392597 TAF15Q92804 592 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN11-202ENST00000392597 TMA7Q9Y2S6 64 aaKnown RBP16.43■□□□□ 0.22
PTPN11-202ENST00000392597 HBE1P02100 147 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 CT45A6P0DMU7 189 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 CT45A5P0DMU8 189 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 CT45A7P0DMV0 189 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 VWC2Q2TAL6 325 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 VKORC1L1Q8N0U8 176 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 AIFM2Q9BRQ8 373 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 RSG1Q9BU20 258 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 FOXA2Q9Y261 457 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-202ENST00000392597 TRAV1-1A0A0B4J248 108 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 C15orf61A6NNL5 157 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 GUCA2BQ16661 112 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 SPSB3Q6PJ21 355 aa16.42■□□□□ 0.22
PTPN11-202ENST00000392597 ABCA4P78363 2273 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 UBR5O95071 2799 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-202ENST00000392597 A0A087X0M5 115 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 UBE2L5PA0A1B0GUS4 154 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 A0A1B0GX30 115 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 C15orf62A8K5M9 175 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 C9JQL5 133 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 SNAPINO95295 136 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 AGAP20933 346 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 RAB2AP61019 212 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 SLC35D1Q9NTN3 355 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 TMEM14BQ9NUH8 114 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 KIAA1456Q9P272 454 aa16.41■□□□□ 0.22
PTPN11-202ENST00000392597 SPTBN1Q01082 2364 aaKnown RBP16.4■□□□□ 0.22
PTPN11-202ENST00000392597 GPR37O15354 613 aa16.4■□□□□ 0.22
PTPN11-202ENST00000392597 IGHV2-70P01814 119 aa16.4■□□□□ 0.22
PTPN11-202ENST00000392597 PLA2G2AP14555 144 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms