RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 ST6GALNAC6Q969X2 333 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMEM140Q9NV12 185 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 CACFD1Q9UGQ2 172 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 H3BP45 60 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 HRASP01112 189 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 GPR6P46095 362 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 DYNLT3P51808 116 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 GNB2P62879 340 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 PDLIM3Q53GG5 364 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 STPG2Q8N412 459 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 CIB3Q96Q77 187 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 SLC35D1Q9NTN3 355 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 DOPEY1Q5JWR5 2465 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 NDUFS7O75251 213 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 RBMXL2O75526 392 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 LIPFP07098 398 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 RELBQ01201 579 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 CLINT1Q14677 625 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR5AN1Q8NGI8 311 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR1S2Q8NGQ3 325 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR52E5Q8NH55 327 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR4A16Q8NH70 328 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGFBPL1Q8WX77 278 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 RHOVQ96L33 236 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 SSBP3Q9BWW4 388 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 QTRT1Q9BXR0 403 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 MRPL20Q9BYC9 149 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 NARFLQ9H6Q4 476 aa9.33□□□□□ -0.92
SMARCAL1-203ENST00000392128 hCG_1809904A0A1W2PP81 198 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 A0A1W2PPE2 198 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 A0A1W2PR64 198 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 A0A1W2PRV1 198 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 C22orf46C9J442 243 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 LY86O95711 162 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 SPP1P10451 314 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 IL3RAP26951 378 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 SULT1A2P50226 295 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 TMEM267Q0VDI3 215 aaPredicted RBP9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 TMEM217Q8N7C4 229 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 DTD1Q8TEA8 209 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 ATP5SQ99766 215 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGHV2-26A0A0B4J1V2 119 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 H0YJW9 148 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 FBXO24O75426 580 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 DFFBO76075 338 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 APOA2P02652 100 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR2B8PP59922 312 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 SPCS3P61009 180 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 SPANXN5Q5MJ07 72 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR13D1Q8NGV5 346 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 SAT2Q96F10 170 aaPredicted RBP9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 PCGF1Q9BSM1 259 aa9.32□□□□□ -0.92
SMARCAL1-203ENST00000392128 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGLV1-47P01700 117 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGKV1-16P04430 117 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 IL6RP08887 468 aaPredicted RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 METTL15P1P0C7V9 234 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 PRRX1P54821 245 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 HBG1P69891 147 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 HBG2P69892 147 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 AANATQ16613 207 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 BEND2Q8NDZ0 799 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 NABP2Q9BQ15 211 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 TET2Q6N021 2002 aaPredicted RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 CEBPZOSA8MTT3 80 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 HAPLN4Q86UW8 402 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
SMARCAL1-203ENST00000392128 LOC105371242A0A075B767 164 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 TRAV3A0A0B4J244 114 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 M0R1W7 72 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 IFNA17P01571 189 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 DIAPH2-AS1Q14236 149 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 TGIF2LXQ8IUE1 241 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR4C12Q96R67 309 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 ONECUT1Q9UBC0 465 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 STRAPQ9Y3F4 350 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms