RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 FAM90A26D6RGX4 464 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 MLNRO43193 412 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 PSPNO60542 156 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 CLDN1O95832 211 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 IGKV1-39P01597 117 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 IGKV1-5P01602 117 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 HBZP02008 142 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 IGKV1D-39P04432 117 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 NKX6-1P78426 367 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-204ENST00000392003 FOXF2Q12947 444 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 Q6ZRM9 215 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 BHLHA15Q7RTS1 189 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-204ENST00000392003 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 PPP1R35Q8TAP8 253 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 TPRP12270 2363 aaKnown RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ICE1Q9Y2F5 2266 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 SPINT2O43291 252 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 KITLGP21583 273 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 LMO1P25800 156 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 CEACAM3P40198 252 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 SELENOVP59797 346 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 PAX5Q02548 391 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF585BQ52M93 769 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 SNX22Q96L94 193 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 SCRT1Q9BWW7 348 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 COL25A1Q9BXS0 654 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 HES4Q9HCC6 221 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF71Q9NQZ8 489 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 KRASP01116 189 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 CCL20P78556 96 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 GUSBP1Q15486 140 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 OR52L2PQ8NGH6 319 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 MUCL1Q96DR8 90 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 MDKP21741 143 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 COL10A1Q03692 680 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 WDR82Q6UXN9 313 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 PRR7Q8TB68 274 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 LRRC29Q8WV35 223 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 PINX1Q96BK5 328 aaKnown RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF48Q96MX3 618 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-204ENST00000392003 DUSP13Q9UII6 198 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 LAMP3Q9UQV4 416 aa8.08□□□□□ -1.12
COL6A3-204ENST00000392003 TRAV26-1A0A087WT03 109 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 IGHV2OR16-5A0A0B4J2B6 119 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 IGLV2-14P01704 120 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 AMBPP02760 352 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 TRGC1P0CF51 173 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 CRYBA4P53673 196 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 CD81P60033 236 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 UBE2KP61086 200 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 WFIKKN1Q96NZ8 548 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.07□□□□□ -1.12
COL6A3-204ENST00000392003 KIAA2026Q5HYC2 2103 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 PRR14LQ5THK1 2151 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 TM4SF5O14894 197 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 SLC38A11Q08AI6 406 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 GTF3C1Q12789 2109 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 EDDM3AQ14507 147 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 TDRG1Q3Y452 100 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 OCIAD2Q56VL3 154 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 TCTEX1D1Q8N7M0 179 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 OR2Z1Q8NG97 314 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 ABHD5Q8WTS1 349 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 FRZBQ92765 325 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 NIPSNAP3BQ9BS92 247 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 RSG1Q9BU20 258 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 PCNX1Q96RV3 2341 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 NBASA2RRP1 2371 aa8.07□□□□□ -1.12
COL6A3-204ENST00000392003 KIAA1324LA8MWY0 1029 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-204ENST00000392003 F6UZH7 168 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 GNG7O60262 68 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 IFNA1P01562 189 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF83P51522 516 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 RPS23P62266 143 aaKnown RBP8.06□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 H2BFWTQ7Z2G1 175 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 C11orf53Q8IXP5 236 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 ZNF525Q8N782 197 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 PSMG3Q9BT73 122 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-204ENST00000392003 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 ROS1P08922 2347 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 CADP27708 2225 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 IGHV1-18A0A0C4DH31 117 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 PRRG2O14669 202 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 OR2C1O95371 312 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 SRP19P09132 144 aaKnown RBP8.06□□□□□ -1.12
COL6A3-204ENST00000392003 G6PCP35575 357 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 GLIPR1P48060 266 aa8.06□□□□□ -1.12
COL6A3-204ENST00000392003 SERF2P84101 59 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms