RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TRBV5-4A0A0C4DH59 114 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 CXCL10P02778 98 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 LSM6P62312 80 aaKnown RBP10.66□□□□□ -0.7
CHD3-203ENST00000380358 S100A7L2Q5SY68 101 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 CRYBA2P53672 197 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
CHD3-203ENST00000380358 DSPPQ9NZW4 1301 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 TGIF2-C20orf24A0A0A6YYL0 155 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 CXorf51AA0A1B0GTR3 108 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 TOPAZ1Q8N9V7 1692 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 NPIPB4C9JG80 1138 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 SYNGR3O43761 229 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 FOXH1O75593 365 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 FGF5P12034 268 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 GATD1Q8NB37 220 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 OR10S1Q8NGN2 331 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 MMD2Q8IY49 270 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 KLHDC2Q9Y2U9 406 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 ASPDHA6ND91 283 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 SAP30O75446 220 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 PRR31Q5SQ13 230 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 ATG4DQ86TL0 474 aaPredicted RBP10.65□□□□□ -0.7
CHD3-203ENST00000380358 SPSB2Q99619 263 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 OR5AC2Q9NZP5 309 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 LRP6O75581 1613 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 CXorf65A6NEN9 183 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 MGST3O14880 152 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 ASIPP42127 132 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 FDCSPQ8NFU4 85 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 C17orf51A8MQB3 221 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 PRR33A8MZF0 331 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 ATP5LO75964 103 aa10.65□□□□□ -0.7
CHD3-203ENST00000380358 EVI2AP22794 236 aa10.65□□□□□ -0.71
CHD3-203ENST00000380358 HOXA6P31267 233 aa10.65□□□□□ -0.71
CHD3-203ENST00000380358 CKAP5Q14008 2032 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 LHBP01229 141 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 CRHP06850 196 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 LYNX1G3V0Z9 82 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 SMIM13P0DJ93 91 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 LYNX1P0DP58 116 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 LINC00158P58513 81 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
CHD3-203ENST00000380358 TMEM52Q8NDY8 209 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 PAX2Q02962 417 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 N4BP2Q86UW6 1770 aaPredicted RBP10.64□□□□□ -0.71
CHD3-203ENST00000380358 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 A0A1W2PQM1 296 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 LINC00614P0C842 121 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 ZIC1Q15915 447 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 OR10AG1Q8NH19 301 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 C14orf144Q96I85 54 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 SH3BGRL3Q9H299 93 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 ZNF107Q9UII5 783 aaPredicted RBP10.64□□□□□ -0.71
CHD3-203ENST00000380358 TCF24Q7RTU0 167 aa10.64□□□□□ -0.71
CHD3-203ENST00000380358 KLF14Q8TD94 323 aaPredicted RBP10.64□□□□□ -0.71
CHD3-203ENST00000380358 TNFSF10P50591 281 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 HIST1H4AP62805 103 aaKnown RBP10.63□□□□□ -0.71
CHD3-203ENST00000380358 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 DEGS2Q6QHC5 323 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
CHD3-203ENST00000380358 PITX3O75364 302 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 ZCCHC24Q8N2G6 241 aaKnown RBP10.63□□□□□ -0.71
CHD3-203ENST00000380358 FER1L5A0AVI2 2057 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 DOCK10Q96BY6 2186 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 PEX7O00628 323 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 HOXA5P20719 270 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 ANXA2RQ3ZCQ2 193 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 C1orf122Q6ZSJ8 110 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 PPP1R27Q86WC6 154 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 APCDD1LQ8NCL9 501 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 CENPVL1A0A0U1RR11 272 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 KLK8O60259 260 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 PRSS53Q2L4Q9 553 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 FGFRL1Q8N441 504 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 PKIAP61925 76 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 CD300CQ08708 224 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 FOXJ2Q9P0K8 574 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 VENTXO95231 258 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 SP9P0CG40 484 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 LRTM2Q8N967 370 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 TRAF4Q9BUZ4 470 aaPredicted RBP10.63□□□□□ -0.71
CHD3-203ENST00000380358 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
CHD3-203ENST00000380358 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 ODAMA1E959 279 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 AHRRA9YTQ3 701 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 OR11H7Q8NGC8 314 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms