RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RCC1LQ96I51 464 aaKnown RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 IDI2-AS1Q9NZ38 188 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 FAM106CPP0CH98 169 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 EBLN2Q6P2I7 272 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 ZNF501Q96CX3 271 aaPredicted RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 TMEM242Q9NWH2 141 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 A0A0J9YW62 118 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 AHRRA9YTQ3 701 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 IGHV3-13P01766 116 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 IGHV3-7P01780 117 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 MYF5P13349 255 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 C19orf54Q5BKX5 351 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 ZNF362Q5T0B9 420 aaPredicted RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 FBLN5Q9UBX5 448 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 ZNF324O75467 553 aaPredicted RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 UNC119Q13432 240 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 TMEM186Q96B77 213 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 SLC25A17O43808 307 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 UCP1P25874 307 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 SLC35B1P78383 322 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 CENPWQ5EE01 88 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 MRPL52Q86TS9 123 aaKnown RBP8.21□□□□□ -1.09
SNX1-202ENST00000380285 APOBEC4Q8WW27 367 aaKnown RBP8.21□□□□□ -1.09
SNX1-202ENST00000380285 ANOS1P23352 680 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 CTAG1AP78358 180 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 TMEM54Q969K7 222 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 C16orf92Q96LL3 132 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 KIR2DL4Q99706 377 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 RAXQ9Y2V3 346 aa8.21□□□□□ -1.09
SNX1-202ENST00000380285 F8VVB4 439 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 F8VWA3 439 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 MDKP21741 143 aaPredicted RBP8.21□□□□□ -1.1
SNX1-202ENST00000380285 HERPUD1Q15011 391 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 FMC1Q96HJ9 113 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 SOSTQ9BQB4 213 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 MEF2CQ06413 473 aaPredicted RBP8.21□□□□□ -1.1
SNX1-202ENST00000380285 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 C1orf210Q8IVY1 113 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 NPCDR1Q9BY65 106 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 TTTY12Q9BZ98 90 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 RABAC1Q9UI14 185 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 TCF19Q9Y242 345 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 A0A1B0GTI1 187 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 ZNF205O95201 554 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 ARF6P62330 175 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 ZNF818PQ6ZRF7 136 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 FAM214BQ7L5A3 538 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 AMELYQ99218 206 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 CALYQ9NYX4 217 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 DOCK3Q8IZD9 2030 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 OR11H12B2RN74 326 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 TMEM229AB2RXF0 380 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 DCAF10Q5QP82 559 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 OR11H1Q8NG94 326 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 OR11H2Q8NH07 326 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 CLDND2Q8NHS1 167 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 NABP2Q9BQ15 211 aa8.21□□□□□ -1.1
SNX1-202ENST00000380285 IGHV1-45A0A0A0MS14 117 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 PRR33A8MZF0 331 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 FAM157AC9JC47 383 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 SPINT1O43278 529 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 CRYBB3P26998 211 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 TSPOP30536 169 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 Q5BKY6 102 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 DNM1P46Q6ZS02 220 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 SCARF2Q96GP6 870 aaPredicted RBP8.2□□□□□ -1.1
SNX1-202ENST00000380285 ZNF488Q96MN9 340 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 CACNA1DQ01668 2161 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 FREM3P0C091 2139 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
SNX1-202ENST00000380285 KRTCAP3Q53RY4 240 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 C2orf83Q53S99 150 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 ASPHD2Q6ICH7 369 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 LINC00470Q9BZP3 86 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 SCN10AQ9Y5Y9 1956 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 A0A0G2JK05 382 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 ZNF600Q6ZNG1 722 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 RPRMQ9NS64 109 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 DOCK4Q8N1I0 1966 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 C1QTNF9BB2RNN3 333 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 RTP5Q14D33 572 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 SAMD13Q5VXD3 122 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 ZNF441Q8N8Z8 693 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 OR4D5Q8NGN0 318 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 SDF2L1Q9HCN8 221 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.2□□□□□ -1.1
SNX1-202ENST00000380285 LCTP09848 1927 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
SNX1-202ENST00000380285 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 A0A1W2PP11 408 aa8.2□□□□□ -1.1
SNX1-202ENST00000380285 FGF5P12034 268 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms