RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TMEM267Q0VDI3 215 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF343Q6P1L6 599 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 DRAM1Q8N682 238 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF565Q8N9K5 539 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 OR2Z1Q8NG97 314 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 OR2V2Q96R30 315 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 FZR1Q9UM11 496 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 DOPEY1Q5JWR5 2465 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF727A8MUV8 499 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 PDLIM3Q53GG5 364 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 SOHLH1Q5JUK2 328 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 WDR25Q64LD2 544 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 SLC16A13Q7RTY0 426 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 CMTM1Q8IZ96 169 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 MBD6Q96DN6 1003 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 RSG1Q9BU20 258 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 RAB1BQ9H0U4 201 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 MSL2Q9HCI7 577 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 SYNGR2O43760 224 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 DFFBO76075 338 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 NXPH3O95157 252 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 OR2C1O95371 312 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 PRH1P02810 166 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 BCL2P10415 239 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 FAM53AQ6NSI3 398 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF429Q86V71 674 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 COQ2Q96H96 371 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 PYGO2Q9BRQ0 406 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 CACNG5Q9UF02 275 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 SOD3P08294 240 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 RPL30P62888 115 aaKnown RBP6.35□□□□□ -1.39
CDKL5-202ENST00000379996 LRRC75A-AS1Q8N1F1 130 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 TMEM217Q8N7C4 229 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 RDH5Q92781 318 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 OR4C12Q96R67 309 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 P2RX4Q99571 388 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 OR51M1Q9H341 326 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 RELNP78509 3460 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 B4DEV8 164 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 M0R036 132 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 RAMP3O60896 148 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 CD81P60033 236 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 SERF2P84101 59 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-202ENST00000379996 ACP7Q6ZNF0 438 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF645Q8N7E2 425 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 OR13D1Q8NGV5 346 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 NANPQ8TBE9 248 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 FAM208BQ5VWN6 2430 aa6.35□□□□□ -1.39
CDKL5-202ENST00000379996 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 LRRC30A6NM36 301 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 PRSS46E5RG02 174 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 HBE1P02100 147 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 AKR1D1P51857 326 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 CR1LQ2VPA4 569 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 TMEM41BQ5BJD5 291 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 KIAA2026Q5HYC2 2103 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 KRBOX4Q5JUW0 171 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 ITLN1Q8WWA0 313 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 TVP23CQ96ET8 276 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 SAP30LQ9HAJ7 183 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 SDF2L1Q9HCN8 221 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 DYNLRB1Q9NP97 96 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 KAAG1Q9UBP8 84 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 TRAV39A0A0B4J263 110 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 C15orf65H3BRN8 121 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 TMEM178BH3BS89 294 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 HSPA12AO43301 675 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 CDX1P47902 265 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 VAMP2P63027 116 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 HOXA4Q00056 320 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 FIP1L1Q6UN15 594 aaKnown RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 C1orf87Q8N0U7 546 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 RPP25LQ8N5L8 163 aaKnown RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 GCSAMQ8N6F7 178 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 OR51H1Q8NH63 302 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 ABHD5Q8WTS1 349 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 C16orf92Q96LL3 132 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 SSX3Q99909 188 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF665Q9H7R5 613 aa6.34□□□□□ -1.39
CDKL5-202ENST00000379996 LIN7CQ9NUP9 197 aaKnown RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 BEX4Q9NWD9 120 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-202ENST00000379996 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms