RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 ZNF146Q15072 292 aa16.22■□□□□ 0.19
TBC1D4-201ENST00000377625 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
TBC1D4-201ENST00000377625 H0YL77 283 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 IGHV3-48P01763 117 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 PRSS2P07478 247 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 DNLZQ5SXM8 178 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 COL5A1-AS1Q5SY13 56 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 FDCSPQ8NFU4 85 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 OR5P3Q8WZ94 311 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 NPIPB3Q92617 1050 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 CHRNA10Q9GZZ6 450 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 SHANK3Q9BYB0 1731 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 IGHV3-35A0A0C4DH35 117 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 LGALS3P17931 250 aaKnown RBP16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 PPP1R32Q7Z5V6 425 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 DPH3Q96FX2 82 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 RARRES2Q99969 163 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 Q6ZT83 130 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 NPDC1Q9NQX5 325 aaPredicted RBP16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 KLF4O43474 513 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 SCGB1A1P11684 91 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 SNRPD3P62318 126 aaKnown RBP16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 IGLV3-21P80748 117 aaPredicted RBP16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 DRAM1Q8N682 238 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 LAMB2P55268 1798 aa16.21■□□□□ 0.19
TBC1D4-201ENST00000377625 PF4P02776 101 aa16.21■□□□□ 0.18
TBC1D4-201ENST00000377625 ZNF56Q15929 161 aa16.21■□□□□ 0.18
TBC1D4-201ENST00000377625 C10orf128Q5T292 105 aa16.21■□□□□ 0.18
TBC1D4-201ENST00000377625 UNC13CQ8NB66 2214 aa16.21■□□□□ 0.18
TBC1D4-201ENST00000377625 TRIP12Q14669 1992 aaPredicted RBP16.21■□□□□ 0.18
TBC1D4-201ENST00000377625 MBNL2Q5VZF2 373 aaKnown RBP16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 SMIM8Q96KF7 97 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 A0A1W2PR77 199 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 RBFOX2O43251 390 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■□□□□ 9.6
TBC1D4-201ENST00000377625 OR4A47Q6IF82 309 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 NABP2Q9BQ15 211 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 SH3BGRL3Q9H299 93 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 PRDM6Q9NQX0 595 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 IGKV3OR2-268A0A0C4DH90 116 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 UNQ9370/PRO34162Q6UXP9 181 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 PUSL1Q8N0Z8 303 aaKnown RBP16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 ZNRF1Q8ND25 227 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 LHFPL5Q8TAF8 219 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 KLK15Q9H2R5 256 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 ASXL3Q9C0F0 2248 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 HIST1H4GQ99525 98 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 C19orf24Q9BVV8 132 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 IL4P05112 153 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 FOCADQ5VW36 1801 aa16.2■□□□□ 0.18
TBC1D4-201ENST00000377625 AGAP20933 346 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 APOBEC3AP31941 199 aaPredicted RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 TMEM187Q14656 261 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 PMCHL1Q16048 86 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 TCF24Q7RTU0 167 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 OR1P1Q8NH06 330 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 SCARF2Q96GP6 870 aaPredicted RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 TGIF2-C20orf24A0A0A6YYL0 155 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 SIGLEC5O15389 551 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 TRGC1P0CF51 173 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 ACSF3Q4G176 576 aaPredicted RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 LINC01590Q5TEZ4 76 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 SMAD7O15105 426 aaKnown RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 IGKV3-20P01619 116 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 HINT1P49773 126 aaPredicted RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 GOLT1AQ6ZVE7 132 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 MRPL32Q9BYC8 188 aaKnown RBP16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 TCF21O43680 179 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 RND3P61587 244 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 J3QW42 95 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 ABLIM2Q6H8Q1 611 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 FBLIM1Q8WUP2 373 aa16.19■□□□□ 0.18
TBC1D4-201ENST00000377625 HIST1H1AQ02539 215 aaPredicted RBP16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 CIRBPQ14011 172 aaKnown RBP16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 LOC390937A0A1W2PQ73 354 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 FABP2P12104 132 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 TMEM14DPA8MWL7 114 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 MOSP00540 346 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 EGR4Q05215 589 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 FOXD3Q9UJU5 478 aaPredicted RBP16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 RFPL3SP0C7P2 107 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 SRIP30626 198 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 MEIG1Q5JSS6 88 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 LINC00470Q9BZP3 86 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 A0A0B4J293 547 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 OTX1P32242 354 aaPredicted RBP16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 UCP3P55916 312 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 FAM159AQ6UWV7 190 aa16.18■□□□□ 0.18
TBC1D4-201ENST00000377625 SEC16AO15027 2179 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 RPL39P5Q59GN2 51 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 IGHV3OR16-13A0A075B7E8 117 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 IGHV3-74A0A0B4J1X5 117 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 TIMM23BQ5SRD1 257 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 GAGE10A6NGK3 116 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 SIGLEC12Q96PQ1 595 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 TMEM70Q9BUB7 260 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 FOXI3A8MTJ6 420 aaPredicted RBP16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 PPP1R17O96001 155 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 ASPHD2Q6ICH7 369 aa16.17■□□□□ 0.18
TBC1D4-201ENST00000377625 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms