RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 ZP4Q12836 540 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 TGIF1Q15583 401 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 C1QAP02745 245 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 SEC11BP0C7V7 166 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 KLF14Q8TD94 323 aaPredicted RBP11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 TNFSF18Q9UNG2 199 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 OR9G1Q8NH87 305 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 LRRC3BQ96PB8 259 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 IL4P05112 153 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 CFAP161Q6P656 301 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 LINC00470Q9BZP3 86 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 ELOVL5Q9NYP7 299 aa11.22□□□□□ -0.61
SLC44A1-202ENST00000374723 LINC01587Q99440 93 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 H3BTX0 84 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 FOXS1O43638 330 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 VGLL1Q99990 258 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 MT-ND6P03923 174 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 SLC22A18ASQ8N1D0 253 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 MRPL18Q9H0U6 180 aaKnown RBP11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 HLA-DQA1P01909 254 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.61
SLC44A1-202ENST00000374723 TMEM160Q9NX00 188 aa11.21□□□□□ -0.62
SLC44A1-202ENST00000374723 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.62
SLC44A1-202ENST00000374723 KCNK7Q9Y2U2 307 aa11.21□□□□□ -0.62
SLC44A1-202ENST00000374723 SCN4AP35499 1836 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 A0A1W2PQF6 199 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 PILRBQ9UKJ0 227 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 A0A0G2JLM5 398 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 ATP1A1-AS1Q5TC04 95 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 KLHDC2Q9Y2U9 406 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 PTP4A3O75365 173 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 IGKV1D-16P01601 117 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 MDKP21741 143 aaPredicted RBP11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 UNC119Q13432 240 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 CDCP2Q5VXM1 449 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 FGFRL1Q8N441 504 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 CLDND2Q8NHS1 167 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 NRIP2Q9BQI9 281 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 CEP250Q9BV73 2442 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 GTF3C1Q12789 2109 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 M0R381 172 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 FOXD3Q9UJU5 478 aaPredicted RBP11.2□□□□□ -0.62
SLC44A1-202ENST00000374723 DXOO77932 396 aaKnown RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 SLC25A20O43772 301 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM52Q8NDY8 209 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM222Q9H0R3 208 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 FOLR2P14207 255 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 MPDZO75970 2070 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 H3BRM9 83 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 C8orf88P0DMB2 117 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 RPS11P62280 158 aaKnown RBP eCLIP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 SPTA1P02549 2419 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 ZIC3O60481 467 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 BHLHA9Q7RTU4 235 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 CNTFRP26992 372 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 PTGDSP41222 190 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 MEF2BQ02080 365 aaPredicted RBP11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 STHQ8IWL8 128 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 ASAH2BP0C7U1 165 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 SMIM6P0DI80 62 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 STPG2Q8N412 459 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 ZPLD1Q8TCW7 415 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
SLC44A1-202ENST00000374723 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 HKR1P10072 659 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 PGLYRP1O75594 196 aaPredicted RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 PEMTQ9UBM1 199 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 DOCK11Q5JSL3 2073 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 PARLQ9H300 379 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 DLL3Q9NYJ7 618 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms