RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ESPL1Q14674 2120 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 TMEM30CPA0ZSE6 113 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RPL8P62917 257 aaKnown RBP8.75□□□□□ -1.01
CD28-202ENST00000374481 C5orf24Q7Z6I8 188 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 SVIPQ8NHG7 77 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RGPD3A6NKT7 1758 aaPredicted RBP8.75□□□□□ -1.01
CD28-202ENST00000374481 RGPD4Q7Z3J3 1758 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 FREM3P0C091 2139 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 CAPZBP47756 277 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 TFF3Q07654 80 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 KRTCAP3Q53RY4 240 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 SAXO1Q8IYX7 474 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 ZNF418Q8TF45 676 aaPredicted RBP8.75□□□□□ -1.01
CD28-202ENST00000374481 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RNASE7Q9H1E1 156 aaKnown RBP8.75□□□□□ -1.01
CD28-202ENST00000374481 EMP1P54849 157 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 GNG3P63215 75 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 HBBP68871 147 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 IGFBP7Q16270 282 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 LINC00114Q6XXX2 140 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 BHLHA15Q7RTS1 189 aaPredicted RBP8.74□□□□□ -1.01
CD28-202ENST00000374481 INSL6Q9Y581 213 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 ATP23Q9Y6H3 246 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 LIPT2A6NK58 231 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 IL4P05112 153 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 PATE4P0C8F1 98 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 FHL5Q5TD97 284 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 ZFAND6Q6FIF0 208 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 DEFB119Q8N690 84 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 KCNK17Q96T54 332 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 HES4Q9HCC6 221 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 ANKRD36A6QL64 1941 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 PCNTO95613 3336 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 A0A1W2PS18 150 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 CEACAM18A8MTB9 384 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 PDLIM4P50479 330 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 GNB1P62873 340 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 KIR3DS1Q14943 382 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 OR2M3Q8NG83 312 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 SLC25A40Q8TBP6 338 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 OCIAD1Q9NX40 245 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 LHFPL6Q9Y693 200 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 DNAJC13O75165 2243 aa8.74□□□□□ -1.01
CD28-202ENST00000374481 DEFB108AA8MXU0 73 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 TNXAQ16473 311 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 GAGE13Q4V321 117 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 ADAMTSL5Q6ZMM2 481 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 ZNF414Q96IQ9 312 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 VCX2Q9H322 139 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 THAP10Q9P2Z0 257 aaPredicted RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 TRPM6Q9BX84 2022 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 NCBP2LA6PVI3 153 aaKnown RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 CDIPTO14735 213 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 IGLL1P15814 213 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 RPL7P18124 248 aaKnown RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 FOXB1Q99853 325 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 PLA2G2EQ9NZK7 142 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 B4GALT7Q9UBV7 327 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 RARRES3Q9UL19 164 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 MCM3APO60318 1980 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 IGLC7A0M8Q6 106 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 IL11P20809 199 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 YPEL5P62699 121 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 FNDC7Q5VTL7 733 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 FAM89BQ8N5H3 189 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 A0A096LPE4 126 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 CD46P15529 392 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 PLGLAQ15195 96 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 PSG3Q16557 428 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 TTC9CQ8N5M4 171 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 SIGLEC12Q96PQ1 595 aa8.73□□□□□ -1.01
CD28-202ENST00000374481 MRPS17Q9Y2R5 130 aaKnown RBP8.73□□□□□ -1.01
CD28-202ENST00000374481 IL18BPO95998 194 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 SCGB1A1P11684 91 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 PEBP1P30086 187 aaKnown RBP8.72□□□□□ -1.01
CD28-202ENST00000374481 LDLRAD1Q5T700 205 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 C9orf40Q8IXQ3 194 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 ZBTB34Q8NCN2 500 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 TSKUQ8WUA8 353 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 FLYWCH2Q96CP2 140 aaKnown RBP8.72□□□□□ -1.01
CD28-202ENST00000374481 GRAMD2BQ96HH9 432 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 A0A1W2PQD3 144 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 ZNF479Q96JC4 524 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 PYGO2Q9BRQ0 406 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 IGHV3-43A0A0B4J1X8 118 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 IGHV3-43DP0DP04 118 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 ZNF83P51522 516 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 WFDC12Q8WWY7 111 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 DNASE2BQ8WZ79 361 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms