RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RELBQ01201 579 aa16.05■□□□□ 0.16
HDAC1-201ENST00000373548 AKR1C8PQ5T2L2 129 aa16.05■□□□□ 0.16
HDAC1-201ENST00000373548 OR4A16Q8NH70 328 aa16.05■□□□□ 0.16
HDAC1-201ENST00000373548 SEC11CQ9BY50 192 aa16.05■□□□□ 0.16
HDAC1-201ENST00000373548 NDUFA2O43678 99 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 COL8A2P25067 703 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 PARD6GQ9BYG4 376 aaPredicted RBP16.04■□□□□ 0.16
HDAC1-201ENST00000373548 HIVEP3Q5T1R4 2406 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 A0A1B0GV50 99 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 IFNA17P01571 189 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 SFTA3P0C7M3 94 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 CT45A6P0DMU7 189 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 CT45A5P0DMU8 189 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 CT45A7P0DMV0 189 aa16.04■□□□□ 0.16
HDAC1-201ENST00000373548 RBMXL1Q96E39 390 aaKnown RBP16.04■□□□□ 0.16
HDAC1-201ENST00000373548 WDR61Q9GZS3 305 aaKnown RBP16.04■□□□□ 0.16
HDAC1-201ENST00000373548 OR8U8P0C7N1 319 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 DLX6P56179 175 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 SPCS3P61009 180 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 GUK1Q16774 197 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 SPSB3Q6PJ21 355 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 PUSL1Q8N0Z8 303 aaKnown RBP16.03■□□□□ 0.16
HDAC1-201ENST00000373548 RHOVQ96L33 236 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 ITPR1Q14643 2758 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 UBE2L5PA0A1B0GUS4 154 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 PPOXP50336 477 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 RPS16P62249 146 aaKnown RBP16.03■□□□□ 0.16
HDAC1-201ENST00000373548 SVBPQ8N300 66 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 LFNGQ8NES3 379 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 OR52E5Q8NH55 327 aa16.03■□□□□ 0.16
HDAC1-201ENST00000373548 PSMG3Q9BT73 122 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-201ENST00000373548 NKX6-2Q9C056 277 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-201ENST00000373548 C15orf62A8K5M9 175 aa16.02■□□□□ 0.16
HDAC1-201ENST00000373548 GPR37O15354 613 aa16.02■□□□□ 0.16
HDAC1-201ENST00000373548 CCL20P78556 96 aa16.02■□□□□ 0.16
HDAC1-201ENST00000373548 TMEM155Q4W5P6 130 aa16.02■□□□□ 0.16
HDAC1-201ENST00000373548 PDLIM3Q53GG5 364 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-201ENST00000373548 SP5Q6BEB4 398 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-201ENST00000373548 ZNF833PQ6ZTB9 187 aa16.02■□□□□ 0.16
HDAC1-201ENST00000373548 H2AFB1P0C5Y9 115 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 OR4A47Q6IF82 309 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 DPPA3Q6W0C5 159 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 OR10P1Q8NGE3 313 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 TAF15Q92804 592 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC1-201ENST00000373548 F12P00748 615 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-201ENST00000373548 ARG1P05089 322 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 POU2AF1Q16633 256 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 ATP6V1FQ16864 119 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 ZNF429Q86V71 674 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 TMEM147Q9BVK8 224 aa16.01■□□□□ 0.15
HDAC1-201ENST00000373548 C15orf61A6NNL5 157 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 VDAC2P45880 294 aaPredicted RBP16■□□□□ 0.15
HDAC1-201ENST00000373548 PEA15Q15121 130 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 PINX1Q96BK5 328 aaKnown RBP16■□□□□ 0.15
HDAC1-201ENST00000373548 EIF5A2Q9GZV4 153 aaKnown RBP16■□□□□ 0.15
HDAC1-201ENST00000373548 SLC35D1Q9NTN3 355 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 IGHV2-70P01814 119 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 GNB2P62879 340 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 HIPK2Q9H2X6 1198 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 VSIRQ9H7M9 311 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 RPRMQ9NS64 109 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 TCF19Q9Y242 345 aa16■□□□□ 0.15
HDAC1-201ENST00000373548 FSTL3O95633 263 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 LY86O95711 162 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 HRASP01112 189 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 IGKV1-16P04430 117 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 PPT1P50897 306 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 TLE4Q04727 773 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 RTL8BQ17RB0 113 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 OR13D1Q8NGV5 346 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 ZNF596Q8TC21 504 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
HDAC1-201ENST00000373548 MRPL20Q9BYC9 149 aaKnown RBP15.99■□□□□ 0.15
HDAC1-201ENST00000373548 A0A1B0GW64 132 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 BTBD17A6NE02 478 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 DNASE2O00115 360 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 NUPL2O15504 423 aaKnown RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 SERF2P84101 59 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 VWC2Q2TAL6 325 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 DHRS7BQ6IAN0 325 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 C11orf42Q8N5U0 333 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 C8orf31Q8N9H6 132 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 SFT2D1Q8WV19 159 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 PBDC1Q9BVG4 233 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 TMEM14BQ9NUH8 114 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 FOXA2Q9Y261 457 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 PKD1L2Q7Z442 2459 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 SPTBN1Q01082 2364 aaKnown RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 TRBV23-1A0A0A0MS06 115 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 J3QR06 171 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 ZNF841Q6ZN19 808 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 LINC00311Q8N616 119 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 CLCC1Q96S66 551 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 HEYLQ9NQ87 328 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-201ENST00000373548 CBLN4Q9NTU7 201 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 TIMM9Q9Y5J7 89 aa15.98■□□□□ 0.15
HDAC1-201ENST00000373548 A0A087X0M5 115 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 A0A1B0GX30 115 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 FAM74A7A6NL05 159 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 IL6RP08887 468 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms