RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
PGK1-201ENST00000373316 SRXN1Q9BYN0 137 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 ZFP30Q9Y2G7 519 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 CCL2P13500 99 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 SPEM2Q0P670 501 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 TIMM23BQ5SRD1 257 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 TP53BP1Q12888 1972 aaPredicted RBP9.05□□□□□ -0.96
PGK1-201ENST00000373316 ZNF292O60281 2723 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 CEP250Q9BV73 2442 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 TRBV6-6A0A0A6YYG2 114 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 LDLRAD4O15165 306 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 ID1P41134 155 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 LYZP61626 148 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 GNB2P62879 340 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
PGK1-201ENST00000373316 COL5A1-AS1Q5SY13 56 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 SLC25A33Q9BSK2 321 aa9.05□□□□□ -0.96
PGK1-201ENST00000373316 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 CDX4O14627 284 aaPredicted RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 NHLH1Q02575 133 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 C2orf68Q2NKX9 166 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 Q6AWC8 147 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 FAM166AQ6J272 317 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 OR9G1Q8NH87 305 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 ASCL3Q9NQ33 180 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 SNURFLB1AK76 121 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 TMPRSS2O15393 492 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 RPL29P47914 159 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 AESQ08117 197 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 ERASQ7Z444 233 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 SNRNP40Q96DI7 357 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 CEACAM18A8MTB9 384 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 ZNF735P0CB33 412 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 GLRXP35754 106 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 CLDN18P56856 261 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 C9orf152Q5JTZ5 239 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 ZNF383Q8NA42 475 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 TLNRD1Q9H1K6 362 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 A0A0B4J293 547 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 ACAA1P09110 424 aaPredicted RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 BTF3P20290 206 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 GPX4P36969 197 aaPredicted RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 RPL30P62888 115 aaKnown RBP9.04□□□□□ -0.96
PGK1-201ENST00000373316 PLAC9Q5JTB6 97 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 FAM209BQ5JX69 171 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 FOXL2NBQ6ZUU3 175 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 OR4C13Q8NGP0 309 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 SGMS2Q8NHU3 365 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 CA5BP1Q8WTZ4 195 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 CCL17Q92583 94 aa9.04□□□□□ -0.96
PGK1-201ENST00000373316 A0A1W2PS18 150 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 WISP1O95388 367 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 FAM87AP0C7U9 286 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 CEACAM1P13688 526 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 PPP1CCP36873 323 aaKnown RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 TMEM183AQ8IXX5 376 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 OR52E5Q8NH55 327 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 TRAV14DV4A0A0A6YYC5 116 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 MARCH11A6NNE9 402 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 LYL1P12980 280 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 RPL11P62913 178 aaKnown RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 ZNF818PQ6ZRF7 136 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 DNAJC4Q9NNZ3 241 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 ZZEF1O43149 2961 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 TAS2R60P59551 318 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 C12orf54Q6X4T0 127 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 QTRT1Q9BXR0 403 aaKnown RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 TMEM140Q9NV12 185 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 CLEC5AQ9NY25 188 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 LY6G6EA0A0G2JKS1 128 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 SLC16A13Q7RTY0 426 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 MS4A7Q9GZW8 240 aaPredicted RBP9.03□□□□□ -0.96
PGK1-201ENST00000373316 U3KQA8 63 aa9.03□□□□□ -0.96
PGK1-201ENST00000373316 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.02□□□□□ -0.96
PGK1-201ENST00000373316 SS18L1O75177 396 aaPredicted RBP9.02□□□□□ -0.96
PGK1-201ENST00000373316 NCMAPQ5T1S8 102 aa9.02□□□□□ -0.96
PGK1-201ENST00000373316 IBA57Q5T440 356 aaKnown RBP9.02□□□□□ -0.96
PGK1-201ENST00000373316 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.96
PGK1-201ENST00000373316 LHFPL1Q86WI0 220 aa9.02□□□□□ -0.96
PGK1-201ENST00000373316 KLF14Q8TD94 323 aaPredicted RBP9.02□□□□□ -0.96
PGK1-201ENST00000373316 ELOVL1Q9BW60 279 aa9.02□□□□□ -0.96
PGK1-201ENST00000373316 FAM186AA6NE01 2351 aa9.02□□□□□ -0.97
PGK1-201ENST00000373316 HEATR5AQ86XA9 2040 aa9.02□□□□□ -0.97
PGK1-201ENST00000373316 ZIC3O60481 467 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms