RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 NHLRC3Q5JS37 347 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 KCNS1Q96KK3 526 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 RNF122Q9H9V4 155 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 CFDP00746 253 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 TEPPQ6URK8 271 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 LDLRAD3Q86YD5 345 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 RFLNBQ8N5W9 214 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 CCL13Q99616 98 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 PARLQ9H300 379 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 CNTRLQ7Z7A1 2325 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 DSPPQ9NZW4 1301 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 ATP5J2P56134 94 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 TMEM177Q53S58 311 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 SF3B6Q9Y3B4 125 aaKnown RBP11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 C5orf47Q569G3 176 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 ITLN1Q8WWA0 313 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 FLYWCH2Q96CP2 140 aaKnown RBP11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 PGLYRP3Q96LB9 341 aa11.44□□□□□ -0.58
RAPGEF1-201ENST00000372189 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 AQP10Q96PS8 301 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF703Q9H7S9 590 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 ITGB1BP1O14713 200 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 HDHD3Q9BSH5 251 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 GPR132Q9UNW8 380 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 FADS6Q8N9I5 356 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 TMEM140Q9NV12 185 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 CD40P25942 277 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 OR5R1Q8NH85 324 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 ABHD14BQ96IU4 210 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF488Q96MN9 340 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 BEX4Q9NWD9 120 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
RAPGEF1-201ENST00000372189 H3BUT2 72 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 EFEMP2O95967 443 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 CD59P13987 128 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 GFRA1P56159 465 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 NFAM1Q8NET5 270 aaPredicted RBP11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 APCDD1LQ8NCL9 501 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 OR11H4Q8NGC9 324 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 LINC01560Q8TB33 94 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 KCNE5Q9UJ90 142 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 CHCHD2Q9Y6H1 151 aaPredicted RBP11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 CD74P04233 296 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 PDLIM4P50479 330 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 LRRC75AQ8NAA5 344 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 SLC25A38Q96DW6 304 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 RNF125Q96EQ8 232 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNHIT1O43257 154 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 TMEM252Q8N6L7 170 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 P2RX4Q99571 388 aa11.42□□□□□ -0.58
RAPGEF1-201ENST00000372189 SBF1O95248 1867 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 RUNX1Q01196 453 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 F11RQ9Y624 299 aaKnown RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 FOLR2P14207 255 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 PNKDQ8N490 385 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 FAM57AQ8TBR7 257 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 TLNRD1Q9H1K6 362 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 FNDC4Q9H6D8 234 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 NPIPB7O75200 414 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 RFPL3SP0C7P2 107 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 DUX4L9Q6RFH8 374 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF502Q8TBZ5 544 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 AQP3Q92482 292 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 FOXC2Q99958 501 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 HLA-DRB1P01911 266 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 HBZP02008 142 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 HIST1H1BP16401 226 aaKnown RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 PAX2Q02962 417 aa11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF1-201ENST00000372189 C9orf172C9J069 976 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 MGST3O14880 152 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 NDUFA2O43678 99 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 CACNG7P62955 275 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 GCM2O75603 506 aaPredicted RBP11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZXDCQ2QGD7 858 aaPredicted RBP11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 GAGE2AQ6NT46 116 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRIOBPQ9H2D6 2365 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 IGKV3D-11A0A0A0MRZ8 115 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 CLDN14O95500 239 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms