RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CFDP00746 253 aaPredicted RBP16.71■□□□□ 0.26
LMO4-202ENST00000370544 ABHD17AQ96GS6 310 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 ZNF841Q6ZN19 808 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 DNM1P46Q6ZS02 220 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.7■□□□□ 0.26
LMO4-202ENST00000370544 CGB1A6NKQ9 187 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 PSG9Q00887 426 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 ATP5G2Q06055 141 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 ZNF343Q6P1L6 599 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 AUP1Q9Y679 476 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 A0A087X0M5 115 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 IGHV2OR16-5A0A0B4J2B6 119 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 A0A0G2JK05 382 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 A0A1B0GX30 115 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 IGHV1-2P23083 117 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 RARRES2Q99969 163 aa16.7■□□□□ 0.26
LMO4-202ENST00000370544 MAS1LP35410 378 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 TET1Q8NFU7 2136 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 Q5BKY6 102 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 PUSL1Q8N0Z8 303 aaKnown RBP16.69■□□□□ 0.26
LMO4-202ENST00000370544 ZNF837Q96EG3 531 aaPredicted RBP16.69■□□□□ 0.26
LMO4-202ENST00000370544 WDYHV1Q96HA8 205 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 OR51M1Q9H341 326 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 LCTP09848 1927 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 C12orf77C9JDV5 145 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 NPIPB11E5RHQ5 1161 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 FXYD3Q14802 87 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 ZNF383Q8NA42 475 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 A0A0G2JMZ2 1700 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 LRRC37A2A6NM11 1700 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 FOXH1O75593 365 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 MT-ND6P03923 174 aa16.69■□□□□ 0.26
LMO4-202ENST00000370544 LOC102723996A0A087X1L8 192 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 PSMB2P49721 201 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 VN1R17PQ8TDU5 208 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 SIGLEC5O15389 551 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 SDHCQ99643 169 aaPredicted RBP16.68■□□□□ 0.26
LMO4-202ENST00000370544 DANCRP0C864 163 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 AREGP15514 252 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 BSPH1Q075Z2 132 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 FAM106AQ4KMX7 169 aa16.68■□□□□ 0.26
LMO4-202ENST00000370544 RNFT1Q5M7Z0 435 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 OR51G1Q8NGK1 321 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 H0YL77 283 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 RND3P61587 244 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 ABLIM2Q6H8Q1 611 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 EIF3GO75821 320 aaKnown RBP eCLIP16.67■□□□□ 0.26
LMO4-202ENST00000370544 IGHV3OR16-10A0A075B7F0 116 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 KLF7O75840 302 aaPredicted RBP16.67■□□□□ 0.26
LMO4-202ENST00000370544 LHFPL5Q8TAF8 219 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 REPIN1Q9BWE0 567 aaKnown RBP16.67■□□□□ 0.26
LMO4-202ENST00000370544 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 CD8AP01732 235 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 LHX2P50458 406 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 SYT8Q8NBV8 401 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 C19orf24Q9BVV8 132 aa16.67■□□□□ 0.26
LMO4-202ENST00000370544 DLX1P56177 255 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 DIRC3C9JPN6 131 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 EFEMP2O95967 443 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 NABP2Q9BQ15 211 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 C9orf106Q8NAJ2 232 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 NPIPB3Q92617 1050 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 MRPL32Q9BYC8 188 aaKnown RBP16.66■□□□□ 0.26
LMO4-202ENST00000370544 CDC42EP3Q9UKI2 254 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 PSG7Q13046 419 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 SRSF9Q13242 221 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMO4-202ENST00000370544 FAM201AQ5SY85 155 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 SPSB4Q96A44 273 aa16.66■□□□□ 0.26
LMO4-202ENST00000370544 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
LMO4-202ENST00000370544 C1QTNF12Q5T7M4 302 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 PEAR1Q5VY43 1037 aaPredicted RBP16.65■□□□□ 0.26
LMO4-202ENST00000370544 TM4SF5O14894 197 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 EEF1AKMT3Q96AZ1 226 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 MTCL1Q9Y4B5 1905 aaKnown RBP16.65■□□□□ 0.26
LMO4-202ENST00000370544 A0A1B0GTI1 187 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 IFITM10A6NMD0 228 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 ERVH48-1M5A8F1 160 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 CA2P00918 260 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 TRGC2P03986 189 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 TMEM177Q53S58 311 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 FAM216BQ8N7L0 139 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 PAM16Q9Y3D7 125 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 CCDC88CQ9P219 2028 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 C5orf52A6NGY3 159 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 CELA3BP08861 270 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 OR13A1Q8NGR1 328 aa16.65■□□□□ 0.26
LMO4-202ENST00000370544 CRYBB3P26998 211 aa16.64■□□□□ 0.26
LMO4-202ENST00000370544 ATP5IP56385 69 aaPredicted RBP16.64■□□□□ 0.26
LMO4-202ENST00000370544 NHLRC3Q5JS37 347 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 PGLYRP4Q96LB8 373 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 ZFP30Q9Y2G7 519 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 LAMTOR1Q6IAA8 161 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 ZNF646O15015 1829 aaPredicted RBP16.64■□□□□ 0.25
LMO4-202ENST00000370544 IQCF6A8MYZ5 107 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 IGHV3-48P01763 117 aa16.64■□□□□ 0.25
LMO4-202ENST00000370544 IGFBP3P17936 291 aaPredicted RBP16.64■□□□□ 0.25
LMO4-202ENST00000370544 ZFP36L1Q07352 338 aaKnown RBP16.64■□□□□ 0.25
LMO4-202ENST00000370544 MRPL13Q9BYD1 178 aaKnown RBP16.64■□□□□ 0.25
LMO4-202ENST00000370544 H3BTX0 84 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 CRXO43186 299 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms