RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 MLLT11Q13015 90 aaPredicted RBP7.84□□□□□ -1.15
CLRN3-201ENST00000368671 ARFRP1Q13795 201 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 PRSS8Q16651 343 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 TEX45Q8NA69 505 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 OR10R2Q8NGX6 335 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 DYNLRB2Q8TF09 96 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 NEURL2Q9BR09 285 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 DCUN1D5Q9BTE7 237 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 AKIP1Q9NQ31 210 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 CEPT1Q9Y6K0 416 aa7.84□□□□□ -1.15
CLRN3-201ENST00000368671 STARD9Q9P2P6 4700 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 FAM223BA6NKX1 122 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 LINC00473A8K010 186 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 BMPR1BO00238 502 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 MFNGO00587 321 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 RGS10O43665 173 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 AIREO43918 545 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 TUSC2O75896 110 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 TPPPO94811 219 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 SAA1P0DJI8 122 aaPredicted RBP7.83□□□□□ -1.16
CLRN3-201ENST00000368671 GADD45AP24522 165 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 DUTP33316 252 aaKnown RBP7.83□□□□□ -1.16
CLRN3-201ENST00000368671 TALDO1P37837 337 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 RANBP1P43487 201 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 MAP2K4P45985 399 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 OR10A3P58181 314 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF45Q02386 682 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 ATP5G2Q06055 141 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 CD300EQ496F6 205 aaPredicted RBP7.83□□□□□ -1.16
CLRN3-201ENST00000368671 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 FAM223AQ8IWN6 122 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 OR2K2Q8NGT1 345 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 DDB2Q92466 427 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 ADTRPQ96IZ2 230 aa7.83□□□□□ -1.16
CLRN3-201ENST00000368671 IGKV1D-8A0A087WSZ0 117 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 PPP5D1E7EU14 171 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 PDCD5O14737 125 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 FCGR3BO75015 233 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 OR2J3O76001 311 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 JTBO76095 146 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 ACTL6BO94805 426 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 CD7P09564 240 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 HIST1H1DP16402 221 aaKnown RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 EDN2P20800 178 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 MECP2P51608 486 aaKnown RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 PSMD7P51665 324 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 AQP4P55087 323 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 CDK10Q15131 360 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 GUCA2BQ16661 112 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 OR2B11Q5JQS5 317 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 LINC00322Q6ZN03 302 aaPredicted RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 H1FOOQ8IZA3 346 aaPredicted RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 DEFB125Q8N687 156 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 OSR1Q8TAX0 266 aaPredicted RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 MGLLQ99685 303 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 HIPK2Q9H2X6 1198 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 DUSP21Q9H596 190 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF430Q9H8G1 570 aaPredicted RBP7.82□□□□□ -1.16
CLRN3-201ENST00000368671 ACOT13Q9NPJ3 140 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 SLC2A8Q9NY64 477 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 SELENOKQ9Y6D0 94 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 BIRC6Q9NR09 4857 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 TENM2Q9NT68 2774 aa7.82□□□□□ -1.16
CLRN3-201ENST00000368671 STAB2Q8WWQ8 2551 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.81□□□□□ -1.16
CLRN3-201ENST00000368671 TRBV9A0A0B4J1U6 114 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 HMX3A6NHT5 357 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 ANKRD65E5RJM6 399 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 RAB27BO00194 218 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 CREBL2O60519 120 aaPredicted RBP7.81□□□□□ -1.16
CLRN3-201ENST00000368671 DIRAS3O95661 229 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 IGHV3-23P01764 117 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
CLRN3-201ENST00000368671 MYL9P24844 172 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 MMD2Q8IY49 270 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 TTC9CQ8N5M4 171 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF645Q8N7E2 425 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 SPIN2AQ99865 258 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 SPIN2BQ9BPZ2 258 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 ATG5Q9H1Y0 275 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 SRD5A3Q9H8P0 318 aa7.81□□□□□ -1.16
CLRN3-201ENST00000368671 NKX1-2Q9UD57 310 aaPredicted RBP7.81□□□□□ -1.16
CLRN3-201ENST00000368671 ELF5Q9UKW6 265 aaPredicted RBP7.81□□□□□ -1.16
CLRN3-201ENST00000368671 RBMY1BA6NDE4 496 aaKnown RBP7.8□□□□□ -1.16
CLRN3-201ENST00000368671 METTL21EPA6NDL7 271 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 RBMY1EA6NEQ0 496 aaKnown RBP7.8□□□□□ -1.16
CLRN3-201ENST00000368671 C2orf70A6NJV1 201 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 IFITM5A6NNB3 132 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 OR11H12B2RN74 326 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 RBMY1DP0C7P1 496 aaKnown RBP7.8□□□□□ -1.16
CLRN3-201ENST00000368671 SSX1Q16384 188 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 DEFB114Q30KQ6 69 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 C15orf32Q32M92 178 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms