RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 WDYHV1Q96HA8 205 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 H7C2G1 150 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 COX5BP10606 129 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 GCSHP23434 173 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 AMMECR1LQ6DCA0 310 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 FAM168AQ92567 244 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF324O75467 553 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 FOXH1O75593 365 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 AMY1AP04745 511 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 IL4P05112 153 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 SULT1A2P50226 295 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 CX3CL1P78423 397 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 PITPNC1Q9UKF7 332 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 J3QR89 54 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 LSM10Q969L4 123 aaKnown RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 DEPPQ9NTK1 212 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 MTCL1Q9Y4B5 1905 aaKnown RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 ASXL3Q9C0F0 2248 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 TGFAP01135 160 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 H1FOOQ8IZA3 346 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 OR13A1Q8NGR1 328 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 YAE1D1Q9NRH1 226 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 SELENOKQ9Y6D0 94 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF883P0CG24 379 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF345Q14585 488 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 GPX1P07203 203 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 EGR1P18146 543 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FHITP49789 147 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 RELBQ01201 579 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 CRYBB3P26998 211 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 GLRXP35754 106 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 TMEM186Q96B77 213 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 LYRM2Q9NU23 88 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-207ENST00000368226 LOC102724200A0A096LPH7 203 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A10PA6NDY2 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A18PA6NE21 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A16PA6NEW6 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A20PA6NIJ5 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A8PA6NJQ4 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A7PA6NKC0 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A22PA8MWA6 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A12PA8MX19 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A5PA8MXJ8 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A23PA8MXZ1 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 IFNL4K9M1U5 179 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A15PP0C7V4 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A13PP0C7W8 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A14PP0C7W9 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM90A24PP0C7X0 464 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 OTX1P32242 354 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-207ENST00000368226 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FAM53AQ6NSI3 398 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-207ENST00000368226 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 CCDC88CQ9P219 2028 aa10.94□□□□□ -0.66
PTPRK-207ENST00000368226 FOXI3A8MTJ6 420 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-207ENST00000368226 PSG7Q13046 419 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 SIGIRRQ6IA17 410 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
PTPRK-207ENST00000368226 EEF1AKMT3Q96AZ1 226 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 TMEM45BQ96B21 275 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 IMMP1LQ96LU5 166 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 B4DEV8 164 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 CSRP3P50461 194 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 SAXO1Q8IYX7 474 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 DPH3Q96FX2 82 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 A0A087WV48 116 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 RRHO14718 337 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 CA2P00918 260 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 Q5BKY6 102 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 MUC21A0A0G2JKD1 596 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 MUC21A0A140T8X8 626 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 CKS2P33552 79 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 H2BFSP57053 126 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 MUC21Q5SSG8 566 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 SPACA3Q8IXA5 215 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 OR51M1Q9H341 326 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 PATJQ8NI35 1801 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 ANOS1P23352 680 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 TMEM187Q14656 261 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 SYT8Q8NBV8 401 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
PTPRK-207ENST00000368226 HSPB8Q9UJY1 196 aa10.93□□□□□ -0.66
PTPRK-207ENST00000368226 IGLV3-19P01714 112 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 SERF2P84101 59 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 C19orf54Q5BKX5 351 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms