RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PLPP1O14494 284 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PBOV1Q9GZY1 135 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 DEFB134Q4QY38 66 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CDCP2Q5VXM1 449 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PGLYRP3Q96LB9 341 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 YPEL2Q96QA6 119 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 DUX3Q96PT4 197 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IGKV1D-42A0A075B6H8 117 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 MARCH11A6NNE9 402 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FGF12P61328 243 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ABHD5Q8WTS1 349 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PLEKHB2Q96CS7 222 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 KLF16Q9BXK1 252 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ANKRD10Q9NXR5 420 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TNFRSF18Q9Y5U5 241 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 HHEXQ03014 270 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FGF11Q92914 225 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 MARF1Q9Y4F3 1742 aaKnown RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM255AQ5JRV8 349 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 NHP2Q9NX24 153 aaKnown RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 SPAG17Q6Q759 2223 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TCF21O43680 179 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 MGST1P10620 155 aaKnown RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 HAPLN4Q86UW8 402 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 C11orf42Q8N5U0 333 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 RNF185Q96GF1 192 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 USP54Q70EL1 1684 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PRR30Q53SZ7 412 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 THSD4Q6ZMP0 1018 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PYGO2Q9BRQ0 406 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM208Q9BTX3 173 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CITO14578 2027 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CELA2BP08218 269 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 LIM2P55344 173 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 MESP2Q0VG99 397 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 OR1F12Q8NHA8 337 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 RNF114Q9Y508 228 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FAM24BQ8N5W8 94 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ANAPC13Q9BS18 74 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 HEXA-AS1Q9H8Q6 139 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PMP22Q01453 160 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 SARAFQ96BY9 339 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ATOX1O00244 68 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 AESQ08117 197 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 GPR27Q9NS67 375 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TAAR2Q9P1P5 351 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 DOPEY2Q9Y3R5 2298 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PLA2G5P39877 138 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IKZF5Q9H5V7 419 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 KLF13Q9Y2Y9 288 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 C5P01031 1676 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FBXW9Q5XUX1 488 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM252Q8N6L7 170 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 WDYHV1Q96HA8 205 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 AMELYQ99218 206 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PRSS47A8MTI9 375 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ATG4DQ86TL0 474 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 RPRMQ9NS64 109 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 HRASLS2Q9NWW9 162 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TOGARAM1Q9Y4F4 1720 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1B0GV90 55 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF320A2RRD8 509 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 WNT9BO14905 357 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 RPS27P42677 84 aaKnown RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 MMD2Q8IY49 270 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 KLHDC9Q8NEP7 349 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FAM57AQ8TBR7 257 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CXCL1P09341 107 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TRBV6-1A0A0K0K1D8 114 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 K7N7A8 449 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IL11P20809 199 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 DNASE2BQ8WZ79 361 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 GCM1Q9NP62 436 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IZUMO1RA6ND01 250 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM14DPA8MWL7 114 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 DLX1P56177 255 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 FMN2Q9NZ56 1722 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CACNA1HO95180 2353 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 CABIN1Q9Y6J0 2220 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PIANPQ8IYJ0 282 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 Q96M66 194 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IL36BQ9NZH7 164 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 VHLLQ6RSH7 139 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 JPT1Q9UK76 154 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 ANKHD1Q8IWZ3 2542 aaKnown RBP3.22□□□□□ -1.89
SYNE1-207ENST00000367255 PIEZO1Q92508 2521 aa3.22□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV3-20A0A0C4DH32 117 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM99Q8N816 258 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 NRN1Q9NPD7 142 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 MRM2Q9UI43 246 aaKnown RBP3.21□□□□□ -1.89
SYNE1-207ENST00000367255 ST6GALNAC2Q9UJ37 374 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 MYH14Q7Z406 1995 aaKnown RBP3.21□□□□□ -1.89
SYNE1-207ENST00000367255 HGFACQ04756 655 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 LINC00470Q9BZP3 86 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 EDA2RQ9HAV5 297 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 OTORQ9NRC9 128 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 SCN11AQ9UI33 1791 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms