RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SPERTQ8NA61 448 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 OR10D3Q8NH80 312 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 OR5AK3PQ8NH89 298 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 C12orf43Q96C57 262 aaKnown RBP0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 LRRC45Q96CN5 670 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 C19orf60Q96EN9 201 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 TMA16Q96EY4 203 aaKnown RBP0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 C1orf109Q9NX04 203 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 CHMP5Q9NZZ3 219 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 C22orf24Q9Y442 160 aa0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 PCYT1BQ9Y5K3 369 aaPredicted RBP0.48□□□□□ -2.33
RNU4-48P-201ENST00000365559 MAST2Q6P0Q8 1798 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 LRPPRCP42704 1394 aaKnown RBP0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TMED7-TICAM2A0A0A6YYA0 188 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 A0A0J9YW62 118 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TRAPPC13A5PLN9 417 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 MKRN2OSH3BPM6 223 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 SMLR1H3BR10 107 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 H7C2G1 150 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 YKT6O15498 198 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 ORC5O43913 435 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 HLA-DQB2P05538 268 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 PSMB8P28062 276 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 EMP1P54849 157 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 HADHBP55084 474 aaKnown RBP0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TAS2R20P59543 309 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 SLAMF1Q13291 335 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 SAPCD1Q5SSQ6 148 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 CRLF3Q8IUI8 442 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 BOD1L2Q8IYS8 172 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 RBP7Q96R05 134 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 MED10Q9BTT4 135 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TMEM109Q9BVC6 243 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 NSRP1Q9H0G5 558 aaKnown RBP0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TREM1Q9NP99 234 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 RALGAPA2Q2PPJ7 1873 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 MED12LQ86YW9 2145 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 CACNA1BQ00975 2339 aa0.47□□□□□ -2.33
RNU4-48P-201ENST00000365559 TRAV38-1A0A0B4J264 116 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 ERICH2A1L162 156 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 K7ERQ8 282 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 PPBPP02775 128 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 FKBP1AP62942 108 aaKnown RBP0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 ELOBQ15370 118 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 HLA-DRB5Q30154 266 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 DNAL1Q4LDG9 190 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 RPS19BP1Q86WX3 136 aaKnown RBP0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 SYCE1Q8N0S2 351 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 RAB2BQ8WUD1 216 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 NDEL1Q9GZM8 345 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 SCAF11Q99590 1463 aaKnown RBP0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 RIMS2Q9UQ26 1411 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 DOCK5Q9H7D0 1870 aa0.46□□□□□ -2.34
RNU4-48P-201ENST00000365559 FLT4P35916 1363 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 KIF13BQ9NQT8 1826 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 SYNRGQ9UMZ2 1314 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 ANAPC1Q9H1A4 1944 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 TRPC5OSA6NMA1 111 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 HSBP1L1C9JCN9 74 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 HCRTO43612 131 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 CREBL2O60519 120 aaPredicted RBP0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 ATP6V1G2O95670 118 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 TFPTP0C1Z6 253 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 PET100P0DJ07 73 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 CCL5P13501 91 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 RAB14P61106 215 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 AP1S1P61966 158 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 PMS2P3Q13401 168 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 DEFB115Q30KQ5 88 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 ACSM3Q53FZ2 586 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 RASSF6Q6ZTQ3 369 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 SPATA24Q86W54 205 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 OR5L1Q8NGL2 311 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 SLC37A2Q8TED4 501 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 BBS2Q9BXC9 721 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 ZNHIT6Q9NWK9 470 aaKnown RBP0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 EML6Q6ZMW3 1958 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 A0A1W2PP64 1363 aa0.45□□□□□ -2.34
RNU4-48P-201ENST00000365559 IGKV1-9A0A0C4DH69 117 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 IQCF5A8MTL0 148 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 F8VZ95 297 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 CCRL2O00421 344 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 NDUFS6O75380 124 aaKnown RBP0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 TRGC1P0CF51 173 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 ALDH3A1P30838 453 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 CLDN12P56749 244 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 RPS24P62847 133 aaKnown RBP0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 HLA-DRB3P79483 266 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 JOSD1Q15040 202 aaPredicted RBP0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 TMEM86AQ8N2M4 240 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 LFNGQ8NES3 379 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 TIPINQ9BVW5 301 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 CHST6Q9GZX3 395 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 OR52A5Q9H2C5 316 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 CHMP4BQ9H444 224 aaKnown RBP0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 NAT8Q9UHE5 227 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 TP53TG1Q9Y2A0 90 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 SMARCA4P51532 1647 aa0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 NUP160Q12769 1436 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms