RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 OSR1Q8TAX0 266 aaPredicted RBP16.6■□□□□ 0.25
SHISA4-201ENST00000362011 R3HDM4Q96D70 268 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 MS4A7Q9GZW8 240 aaPredicted RBP16.6■□□□□ 0.25
SHISA4-201ENST00000362011 FAM96BQ9Y3D0 163 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 TMED3Q9Y3Q3 217 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 HRASP01112 189 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 NQO2P16083 231 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 HLA-GP17693 338 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 VDAC1P21796 283 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 BRS3P32247 399 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 ERVK-16P61578 105 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 GGNBP1Q5YKI7 109 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 GSG1LQ6UXU4 331 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 OR4C13Q8NGP0 309 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 OR5M8Q8NGP6 311 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 FLYWCH2Q96CP2 140 aaKnown RBP16.59■□□□□ 0.25
SHISA4-201ENST00000362011 CDC42EP3Q9UKI2 254 aa16.59■□□□□ 0.25
SHISA4-201ENST00000362011 SHOXO15266 292 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 VENTXO95231 258 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 IGKV1-16P04430 117 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 FBP1P09467 338 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 G6PCP35575 357 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 LSM10Q969L4 123 aaKnown RBP16.58■□□□□ 0.24
SHISA4-201ENST00000362011 RRNAD1Q96FB5 475 aaKnown RBP16.58■□□□□ 0.24
SHISA4-201ENST00000362011 SEC22AQ96IW7 307 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 HARBI1Q96MB7 349 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 AIFM2Q9BRQ8 373 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 MEGF9Q9H1U4 602 aa16.58■□□□□ 0.24
SHISA4-201ENST00000362011 C5orf51A6NDU8 294 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 MARCH11A6NNE9 402 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 FAM25EA8MYX2 175 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 SIX6O95475 246 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 KRASP01116 189 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 IGKV1-5P01602 117 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 CXCL3P19876 107 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 RPS16P62249 146 aaKnown RBP16.57■□□□□ 0.24
SHISA4-201ENST00000362011 DMBX1Q8NFW5 382 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 RBMXL1Q96E39 390 aaKnown RBP16.57■□□□□ 0.24
SHISA4-201ENST00000362011 MMP24Q9Y5R2 645 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 NBEAL1Q6ZS30 2694 aa16.57■□□□□ 0.24
SHISA4-201ENST00000362011 ANK2Q01484 3957 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 C13orf42A0A1B0GVH6 325 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 IGKV1D-33P01593 117 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 IGKV1-33P01594 117 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 SNRNP70P08621 437 aaKnown RBP16.56■□□□□ 0.24
SHISA4-201ENST00000362011 POU2AF1Q16633 256 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 NMSQ5H8A3 153 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 FAM120AOSQ5T036 256 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 C9orf139Q6ZV77 190 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 H2BFWTQ7Z2G1 175 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 FAM219AQ8IW50 185 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 SPIN2AQ99865 258 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 SPIN2BQ9BPZ2 258 aa16.56■□□□□ 0.24
SHISA4-201ENST00000362011 A0A0G2JRQ6 117 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 FAM90A9PA6NNJ1 464 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 HNF1AP20823 631 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 HES1Q14469 280 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 KRTAP24-1Q3LI83 254 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
SHISA4-201ENST00000362011 SSX9Q7RTT3 188 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 OR2T10Q8NGZ9 312 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 GPR146Q96CH1 333 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 RHOVQ96L33 236 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 TSNAXQ99598 290 aaKnown RBP16.55■□□□□ 0.24
SHISA4-201ENST00000362011 RNF5Q99942 180 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 PDCD10Q9BUL8 212 aa16.55■□□□□ 0.24
SHISA4-201ENST00000362011 ZNF436Q9C0F3 470 aaPredicted RBP16.55■□□□□ 0.24
SHISA4-201ENST00000362011 SOX21Q9Y651 276 aaPredicted RBP16.55■□□□□ 0.24
SHISA4-201ENST00000362011 MPTX1A8MV57 137 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 MOSP00540 346 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 LGALS7P47929 136 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 DYNLT3P51808 116 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 CD83Q01151 205 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 EBI3Q14213 229 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 LRRC75BQ2VPJ9 315 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 IL17RELQ6ZVW7 336 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 AKAP14Q86UN6 197 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 THNSL2Q86YJ6 484 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 OR10C1Q96KK4 312 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 C2orf50Q96LR7 162 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 CHIAQ9BZP6 476 aa16.54■□□□□ 0.24
SHISA4-201ENST00000362011 CCNKO75909 580 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 P0C879 139 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 FAM106CPP0CH98 169 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 CD24P25063 80 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 SRP14P37108 136 aaKnown RBP16.53■□□□□ 0.24
SHISA4-201ENST00000362011 H2BFSP57053 126 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 IAH1Q2TAA2 248 aaPredicted RBP16.53■□□□□ 0.24
SHISA4-201ENST00000362011 VMA21Q3ZAQ7 101 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 VKORC1L1Q8N0U8 176 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 BCL6BQ8N143 479 aaPredicted RBP16.53■□□□□ 0.24
SHISA4-201ENST00000362011 EAF1Q96JC9 268 aaPredicted RBP16.53■□□□□ 0.24
SHISA4-201ENST00000362011 RANBP3Q9H6Z4 567 aaPredicted RBP16.53■□□□□ 0.24
SHISA4-201ENST00000362011 TMEM140Q9NV12 185 aa16.53■□□□□ 0.24
SHISA4-201ENST00000362011 A0A1B0GU03 582 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SRRM4A7MD48 611 aaKnown RBP16.52■□□□□ 0.24
SHISA4-201ENST00000362011 OR2A4O95047 310 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SAA1P0DJI8 122 aaPredicted RBP16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SLC25A6P12236 298 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms