RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 KIAA1549Q9HCM3 1950 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 DEFB108AA8MXU0 73 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 GPX1P07203 203 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 WNT2P09544 360 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
VAMP1-201ENST00000361716 PKDREJQ9NTG1 2253 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 SNAI2O43623 268 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 SRFP11831 508 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 CA6P23280 308 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 HOXA4Q00056 320 aaPredicted RBP10.72□□□□□ -0.69
VAMP1-201ENST00000361716 C1orf185Q5T7R7 199 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 DOLPP1Q86YN1 238 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 OR10D3Q8NH80 312 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 LOC400499M0QZD8 3231 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 EML6Q6ZMW3 1958 aa10.72□□□□□ -0.69
VAMP1-201ENST00000361716 A0A1W2PR77 199 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 OR2T8A6NH00 312 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 VENTXO95231 258 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 RFPL3SP0C7P2 107 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 ARL14EPLP0DKL9 152 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 LINC00310P59036 64 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 MPV17L2Q567V2 206 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 C20orf204Q6ZNR8 217 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 MMD2Q8IY49 270 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 FGFRL1Q8N441 504 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 NUDT3O95989 172 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 FOXG1P55316 489 aaPredicted RBP10.71□□□□□ -0.69
VAMP1-201ENST00000361716 RPEL1Q2QD12 228 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 TRIM61Q5EBN2 209 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 ABHD14BQ96IU4 210 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 NAA38Q9BRA0 125 aaKnown RBP10.71□□□□□ -0.69
VAMP1-201ENST00000361716 MCRIP2Q9BUT9 160 aaKnown RBP10.71□□□□□ -0.69
VAMP1-201ENST00000361716 TMEM147Q9BVK8 224 aa10.71□□□□□ -0.69
VAMP1-201ENST00000361716 PCNX1Q96RV3 2341 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 DEGS1O15121 323 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 IGKV1-39P01597 117 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 IGKV1D-39P04432 117 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 PTGDSP41222 190 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 SP5Q6BEB4 398 aaPredicted RBP10.71□□□□□ -0.7
VAMP1-201ENST00000361716 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 LINC00696Q6ZRV3 163 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 TPRX1Q8N7U7 411 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 OR2Y1Q8NGV0 311 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 CPT1CQ8TCG5 803 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 NPCDR1Q9BY65 106 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 MEGF9Q9H1U4 602 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 PRO3102Q9H379 93 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 CRIM1Q9NZV1 1036 aa10.71□□□□□ -0.7
VAMP1-201ENST00000361716 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 ZIC3O60481 467 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 VAMP5O95183 116 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 NTF4P34130 210 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 PLP2Q04941 152 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 RNASE7Q9H1E1 156 aaKnown RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 DSPP15924 2871 aaKnown RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 ZNF891A8MT65 544 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 RNF212BA8MTL3 300 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 C17orf112F2Z3M2 114 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 M0R2Z0 102 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 YPEL1O60688 119 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 CLDN14O95500 239 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 APOA2P02652 100 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TFF1P04155 84 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 CEBPDP49716 269 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 KCNMB1Q16558 191 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 FAM27BQ5VT28 67 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 SLC24A4Q8NFF2 622 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 NABP1Q96AH0 204 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 YPEL2Q96QA6 119 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 OR2H1Q9GZK4 316 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TECRQ9NZ01 308 aaKnown RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 CHCHD2Q9Y6H1 151 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 PDE6DO43924 150 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TIMP3P35625 211 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 LINC00205P59089 165 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 RPL31P62899 125 aaKnown RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 SPINK14Q6IE38 97 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 FAM53AQ6NSI3 398 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-201ENST00000361716 IL19Q9UHD0 177 aa10.7□□□□□ -0.7
VAMP1-201ENST00000361716 TECTAO75443 2155 aa10.69□□□□□ -0.7
VAMP1-201ENST00000361716 COL4A2P08572 1712 aa10.69□□□□□ -0.7
VAMP1-201ENST00000361716 CAMPP49913 170 aa10.69□□□□□ -0.7
VAMP1-201ENST00000361716 PLGLB1Q02325 96 aa10.69□□□□□ -0.7
VAMP1-201ENST00000361716 PMCHL1Q16048 86 aa10.69□□□□□ -0.7
VAMP1-201ENST00000361716 ACSF3Q4G176 576 aaPredicted RBP10.69□□□□□ -0.7
VAMP1-201ENST00000361716 SSBP3Q9BWW4 388 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms