RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 ZNF439Q8NDP4 499 aa16.52■□□□□ 0.24
CHD1L-201ENST00000361293 PINX1Q96BK5 328 aaKnown RBP16.52■□□□□ 0.24
CHD1L-201ENST00000361293 RAB39BQ96DA2 213 aa16.52■□□□□ 0.24
CHD1L-201ENST00000361293 MAP1LC3BQ9GZQ8 125 aa16.52■□□□□ 0.24
CHD1L-201ENST00000361293 DEFA4P12838 97 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 IRF2P14316 349 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 RELBQ01201 579 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 ATP6V1FQ16864 119 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 ZNF429Q86V71 674 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 LYG1Q8N1E2 194 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 FAM216AQ8WUB2 273 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 TMEM140Q9NV12 185 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 TIMM9Q9Y5J7 89 aa16.52■□□□□ 0.23
CHD1L-201ENST00000361293 FCN3O75636 299 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 TSPAN9O75954 239 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 RAB7AP51149 207 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 FAM24BQ8N5W8 94 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 OR4A16Q8NH70 328 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
CHD1L-201ENST00000361293 NPCDR1Q9BY65 106 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 TUBA4BQ9H853 241 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 SLC25A22Q9H936 323 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 NQO2P16083 231 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 VWC2Q2TAL6 325 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 ZNF383Q8NA42 475 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 WFIKKN1Q96NZ8 548 aa16.51■□□□□ 0.23
CHD1L-201ENST00000361293 UNKLQ9H9P5 680 aaKnown RBP16.51■□□□□ 0.23
CHD1L-201ENST00000361293 hCG_1809904A0A1W2PP81 198 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 A0A1W2PR64 198 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 A0A1W2PRV1 198 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 ITGB1BP1O14713 200 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 HABP2Q14520 560 aaPredicted RBP16.5■□□□□ 0.23
CHD1L-201ENST00000361293 IDI2-AS1Q9NZ38 188 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 CISD1Q9NZ45 108 aaKnown RBP16.5■□□□□ 0.23
CHD1L-201ENST00000361293 POLEQ07864 2286 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 ZNF727A8MUV8 499 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 NDUFB7P17568 137 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 ERVK-16P61578 105 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 RAB11AP62491 216 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 GNB2P62879 340 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 TLE1Q04724 770 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 FAM90A2PQ658T7 463 aa16.5■□□□□ 0.23
CHD1L-201ENST00000361293 FOLR2P14207 255 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 TNFRSF1AP19438 455 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 MDKP21741 143 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-201ENST00000361293 SPCS3P61009 180 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 DLK1P80370 383 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 MRPS11P82912 194 aaKnown RBP16.49■□□□□ 0.23
CHD1L-201ENST00000361293 NEUROG1Q92886 237 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 TMPRSS5Q9H3S3 457 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 GAB2Q9UQC2 676 aa16.49■□□□□ 0.23
CHD1L-201ENST00000361293 FAM90A9PA6NNJ1 464 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 RRHO14718 337 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 MT-ND4LP03901 98 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 FFAR4Q5NUL3 377 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 Q8N7P7 452 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 OR4S2Q8NH73 311 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 CA5BP1Q8WTZ4 195 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 LHX4Q969G2 390 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 SLC39A9Q9NUM3 307 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 IGF2RP11717 2491 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 ZNF729A6NN14 1252 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-201ENST00000361293 VDAC2P45880 294 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-201ENST00000361293 TMEM170AQ8WVE7 144 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 ZCCHC14Q8WYQ9 949 aaKnown RBP16.48■□□□□ 0.23
CHD1L-201ENST00000361293 RHOVQ96L33 236 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 SAP30LQ9HAJ7 183 aa16.48■□□□□ 0.23
CHD1L-201ENST00000361293 IFNA10P01566 189 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 NIPSNAP3BQ9BS92 247 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 LINC00574Q9H8X3 128 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 HEYLQ9NQ87 328 aaPredicted RBP16.47■□□□□ 0.23
CHD1L-201ENST00000361293 PRELID1Q9Y255 219 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 TAGLN2P37802 199 aaKnown RBP16.47■□□□□ 0.23
CHD1L-201ENST00000361293 KIR2DS2P43631 304 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 ABHD12Q8N2K0 398 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 OR10G4Q8NGN3 311 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 OR10G9Q8NGN4 311 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 OR10G7Q8NGN6 311 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 CORO2AQ92828 525 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 RAB9BQ9NP90 201 aa16.47■□□□□ 0.23
CHD1L-201ENST00000361293 RPUSD1Q9UJJ7 312 aaKnown RBP16.47■□□□□ 0.23
CHD1L-201ENST00000361293 NDUFA2O43678 99 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 GFRA3O60609 400 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 MYOD1P15172 320 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 OR4A47Q6IF82 309 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.46■□□□□ 0.23
CHD1L-201ENST00000361293 YPEL4Q96NS1 127 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 SLC25A10Q9UBX3 287 aaPredicted RBP16.46■□□□□ 0.23
CHD1L-201ENST00000361293 TCF19Q9Y242 345 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 OR2C1O95371 312 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 OR52E5Q8NH55 327 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 CCL17Q92583 94 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 TVP23CQ96ET8 276 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 ZZEF1O43149 2961 aa16.46■□□□□ 0.23
CHD1L-201ENST00000361293 CCL3L1P16619 93 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 RAB5AP20339 215 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 CD1BP29016 333 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 THBS3P49746 956 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 DMRTC2Q8IXT2 367 aaPredicted RBP16.45■□□□□ 0.22
CHD1L-201ENST00000361293 RND1Q92730 232 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms