RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 STAG3L2P0CL84 134 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 STAG3L3P0CL85 134 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 HHEXQ03014 270 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 OR5A2Q8NGI9 324 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 LMX1AQ8TE12 382 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 TMEM54Q969K7 222 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 M0R2Z0 102 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 CRXO43186 299 aaPredicted RBP11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 HSBP1O75506 76 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 CXorf1O96002 111 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 APCSP02743 223 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 ARL14EPLP0DKL9 152 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 SSTR5P35346 364 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 PTGDSP41222 190 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 PRSS12P56730 875 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 GCSAMLQ5JQS6 135 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 PLCXD3Q63HM9 321 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 MRPL43Q8N983 215 aaKnown RBP11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 PLSCR4Q9NRQ2 329 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
SPTSSB-201ENST00000359175 RAB29O14966 203 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 SPINK4O60575 86 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 GTF2H5Q6ZYL4 71 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 ATP6V0BQ99437 205 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 WNT16Q9UBV4 365 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 HS3ST3A1Q9Y663 406 aa11.15□□□□□ -0.63
SPTSSB-201ENST00000359175 TRBV6-6A0A0A6YYG2 114 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 ARF1P84077 181 aaKnown RBP11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 OR2D2Q9H210 308 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 CRYBB3P26998 211 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 YTHDF2Q9Y5A9 579 aaKnown RBP11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 RP1P56715 2156 aa11.14□□□□□ -0.63
SPTSSB-201ENST00000359175 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 H3BMH7 237 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 FGF12P61328 243 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 OSTCQ9NRP0 149 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 DHHO43323 396 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 SYNGR3O43761 229 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 AZU1P20160 251 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 BCL3P20749 454 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 PIGCQ92535 297 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 C19orf25Q9UFG5 118 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 PILRBQ9UKJ0 227 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 TMEM265A0A087WTH1 108 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 WDR74Q6RFH5 385 aaPredicted RBP11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 C20orf204Q6ZNR8 217 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 CHRDL1Q9BU40 450 aa11.13□□□□□ -0.63
SPTSSB-201ENST00000359175 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 C7orf71A4D174 169 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 ZNF16P17020 682 aaPredicted RBP11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 FAM27BQ5VT28 67 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 C16orf47Q6ZP98 133 aaPredicted RBP11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 GP6Q9HCN6 339 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 MTCH1Q9NZJ7 389 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 LRRC30A6NM36 301 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 RRHO14718 337 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 HAND1O96004 215 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 CCL7P80098 99 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
SPTSSB-201ENST00000359175 MT-CO2P00403 227 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 P0C879 139 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 OTX2P32243 289 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 EDDM3BP56851 147 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 YPEL5P62699 121 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 SLC35B1P78383 322 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 GTF3C1Q12789 2109 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 SLAQ13239 276 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 RNF138Q8WVD3 245 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 TRAPPC2LH3BP13 241 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 HSPB6O14558 160 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 ZG16O60844 167 aa11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
SPTSSB-201ENST00000359175 RUNX3Q13761 415 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms