RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RRHO14718 337 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RPA2P15927 270 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 NQO2P16083 231 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RPL15P61313 204 aaKnown RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 ERVK-16P61578 105 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 ZNF585BQ52M93 769 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 DUSP18Q8NEJ0 188 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 NPBQ8NG41 125 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RHOVQ96L33 236 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RASL11BQ9BPW5 248 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 AIFM2Q9BRQ8 373 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 BEX1Q9HBH7 125 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 PLSCR3Q9NRY6 295 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 NDUFA3O95167 84 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 SAA1P0DJI8 122 aaPredicted RBP12.14□□□□□ -0.47
TPM1-206ENST00000358278 UCP1P25874 307 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RAB25P57735 213 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 DHODHQ02127 395 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 PSG5Q15238 335 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 FAM71E2Q8N5Q1 922 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 Q8N9W7 124 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
TPM1-206ENST00000358278 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
TPM1-206ENST00000358278 OR4E1P0C645 316 aa12.13□□□□□ -0.47
TPM1-206ENST00000358278 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
TPM1-206ENST00000358278 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
TPM1-206ENST00000358278 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
TPM1-206ENST00000358278 SFT2D2O95562 160 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 KRASP01116 189 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 G6PCP35575 357 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 AKR1C2P52895 323 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 UBE2KP61086 200 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 PRIMA1Q86XR5 153 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 RNASE11Q8TAA1 199 aaKnown RBP12.12□□□□□ -0.47
TPM1-206ENST00000358278 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
TPM1-206ENST00000358278 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
TPM1-206ENST00000358278 ATG12O94817 140 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 AMY1AP04745 511 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 BLCAPP62952 87 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 SRPXP78539 464 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 DHRS2Q13268 280 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 TMEM187Q14656 261 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
TPM1-206ENST00000358278 LYG2Q86SG7 212 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 RBPMSQ93062 196 aaKnown RBP12.11□□□□□ -0.47
TPM1-206ENST00000358278 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 SIGLEC9Q9Y336 463 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 INMT-MINDY4F8WBC2 141 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 KBTBD11O94819 623 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 OR2A4O95047 310 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 CDS2O95674 445 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 SPNP16150 400 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 TMEM268Q5VZI3 342 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 LIN54Q6MZP7 749 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 OR2A7Q96R45 310 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
TPM1-206ENST00000358278 RANBP3Q9H6Z4 567 aaPredicted RBP12.11□□□□□ -0.47
TPM1-206ENST00000358278 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
TPM1-206ENST00000358278 CREBL2O60519 120 aaPredicted RBP12.1□□□□□ -0.47
TPM1-206ENST00000358278 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
TPM1-206ENST00000358278 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 LGI3Q8N145 548 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 OR52B4Q8NGK2 314 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 LHFPL5Q8TAF8 219 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
TPM1-206ENST00000358278 SEC22AQ96IW7 307 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
TPM1-206ENST00000358278 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms