RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 THYN1Q9P016 225 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 JKAMPQ9P055 326 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 F8W1H4 67 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 FAM90A2PQ658T7 463 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 FOXL2NBQ6ZUU3 175 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 PRR7Q8TB68 274 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 RHOVQ96L33 236 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SIGLEC12Q96PQ1 595 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 LOC285556D6RIA3 1793 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SAMD13Q5VXD3 122 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 LYPD1Q8N2G4 141 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 OR2Z1Q8NG97 314 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 KCNS1Q96KK3 526 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 MALRD1Q5VYJ5 2156 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 LIFP15018 202 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 VMA21Q3ZAQ7 101 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 OCIAD2Q56VL3 154 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 LRRC3CA6NJW4 275 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 MYOZ3Q8TDC0 251 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 CRISPLD2Q9H0B8 497 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SHISA9B4DS77 424 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 BATF2Q8N1L9 274 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 GAGE12BA1L429 117 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 PPP1CCP36873 323 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF775Q96BV0 537 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 COL6A6A6NMZ7 2263 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 NKX6-3A6NJ46 265 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 GPR183P32249 361 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 LYSMD4Q5XG99 296 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SH3BGRL3Q9H299 93 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ELOVL5Q9NYP7 299 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 A0A1B0GUT8 65 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 G3V3Y1 287 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 K7EMI3 77 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 PEBP1P30086 187 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 KIR2DL1P43626 348 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 FBLN7Q53RD9 439 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 TEX38Q6PEX7 206 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 VASH2Q86V25 355 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 OR2T6Q8NHC8 308 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ZDBF2Q9HCK1 2354 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 C21orf140B9A014 251 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 IER3P46695 156 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 MRGPRFQ96AM1 343 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 THADAQ6YHU6 1953 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 hADV38S2A0JD32 116 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 LINC01545Q5VT33 79 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SMIM27A0A1W2PRY6 76 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CALHM1Q8IU99 346 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TMEFF1Q8IYR6 380 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CENPVL1A0A0U1RR11 272 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 HYPMO75409 117 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 C6orf106Q9H6K1 298 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 MRPS2Q9Y399 296 aaKnown RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 NCBP2LA6PVI3 153 aaKnown RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 MGST3O14880 152 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CT62P0C5K7 136 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TIMP3P35625 211 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 HSD52Q0P140 79 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SHISA6Q6ZSJ9 500 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OR4F17Q8NGA8 305 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 HINT2Q9BX68 163 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 MED29Q9NX70 200 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 C5orf49A4QMS7 147 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SRSF1Q07955 248 aaKnown RBP eCLIP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SIGLEC14Q08ET2 396 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 P2RY6Q15077 328 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OR13H1Q8NG92 308 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 C11orf52Q96A22 123 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 DUSP13Q9UII6 198 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 PCNX3Q9H6A9 2034 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 NHLH1Q02575 133 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 GLI4P10075 376 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 LTBRP36941 435 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 ARG2P78540 354 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 FADS6Q8N9I5 356 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 LANCL2Q9NS86 450 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CDAP32320 146 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 WDR83OSQ9Y284 106 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 EML6Q6ZMW3 1958 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV2-26A0A0B4J1V2 119 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 GPX1P07203 203 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TBR1Q16650 682 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 ARPC1AQ92747 370 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 EP300Q09472 2414 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 ARL14EPLP0DKL9 152 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 PPOXP50336 477 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SMAD4Q13485 552 aaKnown RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 Q56UQ5 140 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 LHX8Q68G74 356 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 RDH5Q92781 318 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OR2D2Q9H210 308 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 WNK1Q9H4A3 2382 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 C3orf36Q3SXR2 165 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 NECAP1Q8NC96 275 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 FMC1Q96HJ9 113 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 HCFC1R1Q9NWW0 138 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms