RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 STARD4Q96DR4 205 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 GATCO43716 136 aaKnown RBP12.86□□□□□ -0.35
STRN3-201ENST00000355683 IFI6P09912 130 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 FOXF2Q12947 444 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 MST1LQ2TV78 715 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
STRN3-201ENST00000355683 C12orf77C9JDV5 145 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 BMPR1BO00238 502 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 ZNF137PP52743 207 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 C1QTNF9BB2RNN3 333 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 PSPNO60542 156 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 SOD3P08294 240 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 CNN1P51911 297 aaKnown RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 Q56UQ5 140 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 DMRTC2Q8IXT2 367 aaPredicted RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 ITLN1Q8WWA0 313 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 TM2D1Q9BX74 207 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 H1FOOQ8IZA3 346 aaPredicted RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 GTF3AQ92664 365 aaKnown RBP12.85□□□□□ -0.35
STRN3-201ENST00000355683 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 S4R3C0 116 aa12.85□□□□□ -0.35
STRN3-201ENST00000355683 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 CXCL1P09341 107 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 CRYGSP22914 178 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 PRDX2P32119 198 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 PYY3Q5JQD4 70 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 OR5AU1Q8NGC0 362 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 PARLQ9H300 379 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
STRN3-201ENST00000355683 OPRK1P41145 380 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 HERPUD1Q15011 391 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 ZNF124Q15973 351 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
STRN3-201ENST00000355683 U3KQA8 63 aa12.84□□□□□ -0.35
STRN3-201ENST00000355683 LHX2P50458 406 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
STRN3-201ENST00000355683 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
STRN3-201ENST00000355683 OR2D3Q8NGH3 330 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 DDA1Q9BW61 102 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 ODAMA1E959 279 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 IGHV2-70P01814 119 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 CD59P13987 128 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 CBLN1P23435 193 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 DLX1P56177 255 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 FAM90A27PA6NNH2 459 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 FGF16O43320 207 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.36
STRN3-201ENST00000355683 FAM214BQ7L5A3 538 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 OR5P3Q8WZ94 311 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 CBY1Q9Y3M2 126 aa12.83□□□□□ -0.36
STRN3-201ENST00000355683 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 SLC17A3O00476 420 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 UBE2CO00762 179 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 ZNF883P0CG24 379 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
STRN3-201ENST00000355683 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
STRN3-201ENST00000355683 TAAR6Q96RI8 345 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 QTRT1Q9BXR0 403 aaKnown RBP12.82□□□□□ -0.36
STRN3-201ENST00000355683 MYOZ1Q9NP98 299 aaPredicted RBP12.82□□□□□ -0.36
STRN3-201ENST00000355683 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 NPIPB13A6NJU9 1138 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 NPIPB4C9JG80 1138 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 CLDN18P56856 261 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 TAS2R45P59539 299 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
STRN3-201ENST00000355683 UNQ6494/PRO21346Q6UXR6 183 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
STRN3-201ENST00000355683 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms