RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR10J6PQ8NGY7 276 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 IZUMO1RA6ND01 250 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 ATP5LO75964 103 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TBX6O95947 436 aaPredicted RBP10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 UCP1P25874 307 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 IGHV1OR15-9A0A0B4J2B8 117 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 MAGEA5P43359 124 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 MEGF9Q9H1U4 602 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 JPT1Q9UK76 154 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A0J9YW62 118 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PRS3 328 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 F2RL2O00254 374 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 SNAI3Q3KNW1 292 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 C19orf54Q5BKX5 351 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 MRPL52Q86TS9 123 aaKnown RBP10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 LRTM2Q8N967 370 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 OR4X2Q8NGF9 303 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 WDR54Q9H977 334 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 PILRAQ9UKJ1 303 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 BTAF1O14981 1849 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TNFSF13O75888 250 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 CD5P06127 495 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 PRSS8Q16651 343 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 FHL5Q5TD97 284 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 SPSB2Q99619 263 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 UBTD1Q9HAC8 227 aa10.88□□□□□ -0.67
SYNCRIP-201ENST00000355238 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 REG1BP48304 166 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 TPRX1Q8N7U7 411 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 LINC01565O15544 149 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 MBNL2Q5VZF2 373 aaKnown RBP10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 DRAM1Q8N682 238 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 NUDT11Q96G61 164 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 CX3CL1P78423 397 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 TRBV24-1A0A075B6N3 115 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 AGFG2O95081 481 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 ADMP35318 185 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 UBALD2Q8IYN6 164 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 AICDAQ9GZX7 198 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 SCO2A0A1W2PP80 73 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 DLX6P56179 175 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM30BQ3MIR4 351 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 FAM19A2Q8N3H0 131 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 TCFL5Q9UL49 500 aa10.87□□□□□ -0.67
SYNCRIP-201ENST00000355238 ABHD12Q8N2K0 398 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 OR10J3Q5JRS4 329 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PQM1 296 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 RRHO14718 337 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 CHODLQ9H9P2 273 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 SNAI2O43623 268 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 MPZP25189 248 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 UCP2P55851 309 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 Q6AWC8 147 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 CT55Q8WUE5 264 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 MS4A5Q9H3V2 200 aa10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNFX1Q9P2E3 1918 aaKnown RBP10.86□□□□□ -0.67
SYNCRIP-201ENST00000355238 CD3EP07766 207 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 COX5BP10606 129 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 SEC11AP67812 179 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 C1orf194Q5T5A4 169 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 LINC00470Q9BZP3 86 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 ELOVL5Q9NYP7 299 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 RABAC1Q9UI14 185 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 ODAMA1E959 279 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM262E9PQX1 116 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 CTHRC1Q96CG8 243 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 DNAL4O96015 105 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PTGDSP41222 190 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 ATP5G3P48201 142 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 C3AR1Q16581 482 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 GOLT1AQ6ZVE7 132 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 BEX4Q9NWD9 120 aaPredicted RBP10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 AMBPP02760 352 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 CRYBA2P53672 197 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms