RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MS4A7Q9GZW8 240 aaPredicted RBP9.15□□□□□ -0.94
SVIP-201ENST00000354193 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 CTSZQ9UBR2 303 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 ITPR1Q14643 2758 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 A0A1W2PPH5 198 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 TAAR5O14804 337 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 DUTP33316 252 aaKnown RBP9.15□□□□□ -0.94
SVIP-201ENST00000354193 AKR1C3P42330 323 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 P2RY1P47900 373 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 KLRD1Q13241 179 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 C4orf17Q53FE4 359 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 SSX8Q7RTT4 187 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 FLYWCH2Q96CP2 140 aaKnown RBP9.15□□□□□ -0.94
SVIP-201ENST00000354193 TMEM56Q96MV1 263 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 MMP24Q9Y5R2 645 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 CRYBG3Q68DQ2 2970 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 IGKV1-16P04430 117 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 H2AFB1P0C5Y9 115 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 FGF7P21781 194 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 TNFRSF9Q07011 255 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 ZNF345Q14585 488 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 AQP10Q96PS8 301 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 PLEKHA3Q9HB20 300 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 ZNF355PQ9NSJ1 428 aa9.15□□□□□ -0.95
SVIP-201ENST00000354193 TMEM50AO95807 157 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 DEFA4P12838 97 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 TNXAQ16473 311 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 ZNF674Q2M3X9 581 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 GNG13Q9P2W3 67 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 LINC00312Q9Y6C7 94 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 HPRT1P00492 218 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 ARG1P05089 322 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 C10orf55Q5SWW7 151 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 HCP5Q6MZN7 132 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 DMRTC2Q8IXT2 367 aaPredicted RBP9.14□□□□□ -0.95
SVIP-201ENST00000354193 ZBTB34Q8NCN2 500 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 NEIL1Q96FI4 390 aaPredicted RBP9.14□□□□□ -0.95
SVIP-201ENST00000354193 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 DFFBO76075 338 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 OR9G9P0C7N8 305 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 RND3P61587 244 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 FAM122CQ6P4D5 195 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 LHX4Q969G2 390 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 LINC00052Q96N35 136 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 SLC39A9Q9NUM3 307 aa9.14□□□□□ -0.95
SVIP-201ENST00000354193 TRBV6-6A0A0A6YYG2 114 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 J3QR06 171 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 B3GALNT1O75752 331 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 RPUSD1Q9UJJ7 312 aaKnown RBP9.13□□□□□ -0.95
SVIP-201ENST00000354193 PUS1Q9Y606 427 aaKnown RBP eCLIP9.13□□□□□ -0.95
SVIP-201ENST00000354193 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 C15orf65H3BRN8 121 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 YPEL1O60688 119 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 WNT2P09544 360 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 GATA4P43694 442 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 NMSQ5H8A3 153 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 YPEL2Q96QA6 119 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 OR4C12Q96R67 309 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 WFDC1Q9HC57 220 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 LOC105371242A0A075B767 164 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 PRRX1P54821 245 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 RAB11AP62491 216 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 HTD2P86397 168 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 MMDQ15546 238 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 ITLN2Q8WWU7 325 aaPredicted RBP9.13□□□□□ -0.95
SVIP-201ENST00000354193 TRAF4Q9BUZ4 470 aaPredicted RBP9.13□□□□□ -0.95
SVIP-201ENST00000354193 UQCC1Q9NVA1 299 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 HIVEP2P31629 2446 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 THBS3P49746 956 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 SULT1A1P50225 295 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 RAB13P51153 203 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 TMEM88Q6PEY1 159 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
SVIP-201ENST00000354193 LHBP01229 141 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 ZNF880Q6PDB4 577 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 Q6ZS49 121 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 IFT22Q9H7X7 185 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 PATZ1Q9HBE1 687 aaKnown RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 LYRM2Q9NU23 88 aaPredicted RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 KIAA0141Q14154 515 aaPredicted RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 CST9LP1Q5W188 147 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 DOK5Q9P104 306 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 SSUH2Q9Y2M2 353 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 RPS10-NUDT3A0A1W2PQS6 291 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 OR4A47Q6IF82 309 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 OR9G1Q8NH87 305 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 CCL19Q99731 98 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 HCFC1P51610 2035 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms