RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 PRNTQ86SH4 94 aa10.93□□□□□ -0.66
COL6A3-203ENST00000353578 NDUFS6O75380 124 aaKnown RBP10.93□□□□□ -0.66
COL6A3-203ENST00000353578 NGFRP08138 427 aa10.93□□□□□ -0.66
COL6A3-203ENST00000353578 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
COL6A3-203ENST00000353578 GZMMP51124 257 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 MRPS11P82912 194 aaKnown RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 SRSF6Q13247 344 aaKnown RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 HBDP02042 147 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 ZNF708P17019 499 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 THAP10Q9P2Z0 257 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 EML6Q6ZMW3 1958 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 J3QT63 122 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 PSG2P11465 335 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 XIRP1Q702N8 1843 aaKnown RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 ATG4DQ86TL0 474 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 DYSFO75923 2080 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 RNF222A6NCQ9 220 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 ZNF146Q15072 292 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 PRSS8Q16651 343 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 ORMDL2Q53FV1 153 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 CXCL16Q9H2A7 254 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 RPP21Q9H633 154 aaKnown RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-203ENST00000353578 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 LIMS1P48059 325 aa10.92□□□□□ -0.66
COL6A3-203ENST00000353578 A0A1W2PS18 150 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 FAM181BA6NEQ2 426 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 RFLNAQ6ZTI6 216 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 ZADH2Q8N4Q0 377 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 TMEM202A6NGA9 273 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 SOCS1O15524 211 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 C1QL1O75973 258 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 BIVMQ86UB2 503 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 MMDQ15546 238 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 ABHD3Q8WU67 409 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 NPCDR1Q9BY65 106 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 TMEM126AQ9H061 195 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 OR2H1Q9GZK4 316 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 COL16A1Q07092 1604 aaPredicted RBP10.91□□□□□ -0.66
COL6A3-203ENST00000353578 SS18L1O75177 396 aaPredicted RBP10.91□□□□□ -0.66
COL6A3-203ENST00000353578 FAM90A9PA6NNJ1 464 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 SOX8P57073 446 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 ZNF750Q32MQ0 723 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 PAAF1Q9BRP4 392 aa10.91□□□□□ -0.66
COL6A3-203ENST00000353578 RRHO14718 337 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 SLC25A38Q96DW6 304 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 RUNX1Q01196 453 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 KISS1RQ969F8 398 aaPredicted RBP10.9□□□□□ -0.66
COL6A3-203ENST00000353578 C1orf61Q13536 156 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 RAB1CQ92928 201 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 CCL28Q9NRJ3 127 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 CLEC5AQ9NY25 188 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 IFITM1P13164 125 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 LHX2P50458 406 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 SLC25A48Q6ZT89 311 aaKnown RBP10.9□□□□□ -0.66
COL6A3-203ENST00000353578 C1QAP02745 245 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 UCP2P55851 309 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 WDR54Q9H977 334 aa10.9□□□□□ -0.66
COL6A3-203ENST00000353578 WNT9BO14905 357 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 NDUFC2O95298 119 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 PGLYRP4Q96LB8 373 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 HARBI1Q96MB7 349 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 RTN4RQ9BZR6 473 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 TRBV6-7A0A0A0MS04 114 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 J3QW42 95 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 FOXF1Q12946 379 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.67
COL6A3-203ENST00000353578 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.67
COL6A3-203ENST00000353578 CACNA1EQ15878 2313 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM131Q92545 1883 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 MGPP08493 103 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 GCHFRP30047 84 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 GLI3P10071 1580 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 TRAV2A0A0B4J234 112 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 K7N7A8 449 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 MOB3BQ86TA1 216 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 ALKBH3Q96Q83 286 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-203ENST00000353578 ANOS1P23352 680 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 DEFB115Q30KQ5 88 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 WIPI1Q5MNZ9 446 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-203ENST00000353578 TRAV8-1A0A0A6YYK1 113 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 IFNL4K9M1U5 179 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 B4GALNT1Q00973 533 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 RNF182Q8N6D2 247 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 OR4A5Q8NH83 315 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 LHX8Q68G74 356 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms