RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SFXN3Q9BWM7 321 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 PARLQ9H300 379 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 MDC1Q14676 2089 aaKnown RBP13.6□□□□□ -0.23
PTPN11-201ENST00000351677 FCGR2BP31994 310 aaPredicted RBP13.6□□□□□ -0.23
PTPN11-201ENST00000351677 C12orf77C9JDV5 145 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 CECR9P0C854 216 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 FAM106CPP0CH98 169 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 SCN5AQ14524 2016 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 PRR19A6NJB7 356 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 J3QRE1 110 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 ACP7Q6ZNF0 438 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 SHISA5Q8N114 240 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 TXNDC17Q9BRA2 123 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 TMPRSS3P57727 454 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 ZNF841Q6ZN19 808 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 TRAV14DV4A0A0A6YYC5 116 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
PTPN11-201ENST00000351677 C8orf88P0DMB2 117 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 AGAP20933 346 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 TFPI2P48307 235 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 ACSF3Q4G176 576 aaPredicted RBP13.59□□□□□ -0.23
PTPN11-201ENST00000351677 PEAR1Q5VY43 1037 aaPredicted RBP13.59□□□□□ -0.23
PTPN11-201ENST00000351677 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 MRPL18Q9H0U6 180 aaKnown RBP13.59□□□□□ -0.23
PTPN11-201ENST00000351677 CD81P60033 236 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 FAM27E3Q08E93 113 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 RPRMQ9NS64 109 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 RNF115Q9Y4L5 304 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 EFEMP2O95967 443 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 OR4C13Q8NGP0 309 aa13.59□□□□□ -0.23
PTPN11-201ENST00000351677 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
PTPN11-201ENST00000351677 KBTBD11O94819 623 aa13.58□□□□□ -0.23
PTPN11-201ENST00000351677 CELA3BP08861 270 aa13.58□□□□□ -0.23
PTPN11-201ENST00000351677 MYOZ3Q8TDC0 251 aa13.58□□□□□ -0.23
PTPN11-201ENST00000351677 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 NDUFA2O43678 99 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 UNQ5815/PRO19632Q6UWF5 114 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 MRPL13Q9BYD1 178 aaKnown RBP13.58□□□□□ -0.24
PTPN11-201ENST00000351677 TRBV23-1A0A0A0MS06 115 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF25P17030 456 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-201ENST00000351677 PAFAH1B2P68402 229 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 STPG3Q8N7X2 389 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.58□□□□□ -0.24
PTPN11-201ENST00000351677 RNF222A6NCQ9 220 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 OR9G1Q8NH87 305 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 WFIKKN1Q96NZ8 548 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 ASXL3Q9C0F0 2248 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 BPIFA4PQ86YQ2 179 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 NABP2Q9BQ15 211 aa13.58□□□□□ -0.24
PTPN11-201ENST00000351677 ZDBF2Q9HCK1 2354 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 RPLP1P05386 114 aaKnown RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 NPIPB3Q92617 1050 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 DCTN5Q9BTE1 182 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 REPIN1Q9BWE0 567 aaKnown RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 OR51M1Q9H341 326 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 SDK2Q58EX2 2172 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 IGLV3-12A0A075B6K2 115 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 LYZL4Q96KX0 146 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 C16orf92Q96LL3 132 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 PF4V1P10720 104 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 RELBQ01201 579 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 KIAA1644Q3SXP7 199 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 LINC01560Q8TB33 94 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 SPSB4Q96A44 273 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 ATXN7O15265 892 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 KIR2DL2P43627 348 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 C17orf98A8MV24 154 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 J3QW42 95 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 M0QZK8 103 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 GGCTO75223 188 aaKnown RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 CA2P00918 260 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 MT-ND6P03923 174 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 CD99P14209 185 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF146Q15072 292 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 TMEM78Q5T7P6 136 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF385CQ66K41 422 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-201ENST00000351677 DYNLRB2Q8TF09 96 aa13.57□□□□□ -0.24
PTPN11-201ENST00000351677 SFTPCP11686 197 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 PSG7Q13046 419 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 TMEM177Q53S58 311 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 OR13A1Q8NGR1 328 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 RCC1LQ96I51 464 aaKnown RBP13.56□□□□□ -0.24
PTPN11-201ENST00000351677 GPR61Q9BZJ8 451 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 OR4C46A6NHA9 309 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 RRHO14718 337 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 IGHV1-2P23083 117 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 GAS1P54826 345 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 GFI1Q99684 422 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 PNKDQ8N490 385 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 SLC25A28Q96A46 364 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms