RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 C1orf174Q8IYL3 243 aa15.42■□□□□ 0.06
SMC4-201ENST00000344722 ZNF501Q96CX3 271 aaPredicted RBP15.42■□□□□ 0.06
SMC4-201ENST00000344722 SOX21Q9Y651 276 aaPredicted RBP15.42■□□□□ 0.06
SMC4-201ENST00000344722 TRAV9-2A0A087WT02 112 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 IZUMO1RA6ND01 250 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 COX5BP10606 129 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 SSTR5P35346 364 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 TMEM108Q6UXF1 575 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 GATAD1Q8WUU5 269 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 MBD3L1Q8WWY6 194 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 CHODLQ9H9P2 273 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 MYO9BQ13459 2157 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 A0A1W2PQF6 199 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 SLC25A17O43808 307 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 MESP2Q0VG99 397 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 ST6GALNAC6Q969X2 333 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 JKAMPQ9P055 326 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 GNB2P62879 340 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 ABHD12Q8N2K0 398 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
SMC4-201ENST00000344722 IGHV3OR15-7A0A075B7D8 119 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 MGPP08493 103 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 COX6CP09669 75 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 PSMG4Q5JS54 123 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 ASCL5Q7RTU5 278 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 FAM19A2Q8N3H0 131 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 SRSF12Q8WXF0 261 aaKnown RBP15.41■□□□□ 0.06
SMC4-201ENST00000344722 AICDAQ9GZX7 198 aa15.41■□□□□ 0.06
SMC4-201ENST00000344722 TDRD15B5MCY1 1934 aaKnown RBP15.4■□□□□ 0.06
SMC4-201ENST00000344722 A0A087WV48 116 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 ZNF146Q15072 292 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 TBR1Q16650 682 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 OR10J3Q5JRS4 329 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 TCF23Q7RTU1 214 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 RND1Q92730 232 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 RPL8P62917 257 aaKnown RBP15.4■□□□□ 0.06
SMC4-201ENST00000344722 TCF24Q7RTU0 167 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 LRTM2Q8N967 370 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 SMOC1Q9H4F8 434 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 TCFL5Q9UL49 500 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 MPV17P39210 176 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 OR4D5Q8NGN0 318 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 WNT5BQ9H1J7 359 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
SMC4-201ENST00000344722 SOX8P57073 446 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 PAQR4Q8N4S7 273 aaPredicted RBP15.4■□□□□ 0.06
SMC4-201ENST00000344722 SCARF2Q96GP6 870 aaPredicted RBP15.4■□□□□ 0.06
SMC4-201ENST00000344722 ZNF414Q96IQ9 312 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 DERL1Q9BUN8 251 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 JPT1Q9UK76 154 aa15.4■□□□□ 0.06
SMC4-201ENST00000344722 AGFG2O95081 481 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 PLAUP00749 431 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 IL4P05112 153 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 C3AR1Q16581 482 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 OR51G1Q8NGK1 321 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 TNFRSF19Q9NS68 423 aa15.39■□□□□ 0.06
SMC4-201ENST00000344722 AREGP15514 252 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 FAM89BQ8N5H3 189 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 SPAG17Q6Q759 2223 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 KRTCAP3Q53RY4 240 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 TRAV1-1A0A0B4J248 108 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 ODAMA1E959 279 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 RRHO14718 337 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 ZNF324O75467 553 aaPredicted RBP15.39■□□□□ 0.05
SMC4-201ENST00000344722 IGKV3-11P04433 115 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 GPR183P32249 361 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 DEFB109BQ30KR1 87 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 INSIG2Q9Y5U4 225 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 TFPI2P48307 235 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 FOXA3P55318 350 aaPredicted RBP15.39■□□□□ 0.05
SMC4-201ENST00000344722 CT55Q8WUE5 264 aa15.39■□□□□ 0.05
SMC4-201ENST00000344722 IGKV1D-43A0A0B4J1Z2 117 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 C7orf71A4D174 169 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 A0A1W2PRS3 328 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 CGAP01215 116 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 UCP2P55851 309 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 MMDQ15546 238 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 GBF1Q92538 1859 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 IGHV3-21A0A0B4J1V1 117 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 IGHV4-34P06331 123 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 RPL27AP46776 148 aaKnown RBP15.38■□□□□ 0.05
SMC4-201ENST00000344722 ZNF788Q6ZQV5 615 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 ZNF714Q96N38 554 aa15.38■□□□□ 0.05
SMC4-201ENST00000344722 ID3Q02535 119 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 C1orf53Q5VUE5 145 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 ZDHHC16Q969W1 377 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 GNB1LQ9BYB4 327 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 IGHV5-10-1A0A0J9YXX1 117 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 C1QTNF9P0C862 333 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 LGALS7P47929 136 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 RND2P52198 227 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 WDR31Q8NA23 367 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 CEACAM1P13688 526 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 SLC22A18ASQ8N1D0 253 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms