RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 BMPR1BO00238 502 aa16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 RNFT1Q5M7Z0 435 aa16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 TAF15Q92804 592 aaKnown RBP eCLIP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 KIF26BQ2KJY2 2108 aa16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 CLRN3Q8NCR9 226 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 TMEM37Q8WXS4 190 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 SOSTQ9BQB4 213 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 A0A087WV48 116 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 ORM1P02763 201 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 THBDP07204 575 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 SMIM8Q96KF7 97 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 K7ENP7 123 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 FCN1O00602 326 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 CACNA1BQ00975 2339 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 J3KRW8 73 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 OR2J3O76001 311 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 ANAPC16Q96DE5 110 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 AQP10Q96PS8 301 aa16.51■□□□□ 0.23
SEMA6C-201ENST00000341697 RPL30P62888 115 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 PLPPR1Q8TBJ4 325 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 WFIKKN1Q96NZ8 548 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 OR4C12Q96R67 309 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 CLDN16Q9Y5I7 305 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 ATP5IP56385 69 aaPredicted RBP16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 C5orf17Q8NAS9 161 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 C7orf69Q9H7B7 122 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 SUMO1P63165 101 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 ATP5G2Q06055 141 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 WDR73Q6P4I2 378 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 MS4A10Q96PG2 267 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 REG1AP05451 166 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 CAMPP49913 170 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 SULT1A2P50226 295 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 H2BFSP57053 126 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 STPG2Q8N412 459 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 FAM24BQ8N5W8 94 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 FAM210BQ96KR6 192 aa16.5■□□□□ 0.23
SEMA6C-201ENST00000341697 GNLYP22749 145 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 A0A0G2JNJ9 132 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 PTBP3O95758 552 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 TGFAP01135 160 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 TPPP2P59282 170 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 RND3P61587 244 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 Q9UFV3 132 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 SLC25A15Q9Y619 301 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 MDC1Q14676 2089 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 IGHV1-46P01743 117 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 FAM106AQ4KMX7 169 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 MIC13Q5XKP0 118 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 PROB1E7EW31 1015 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 MBNL2Q5VZF2 373 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 RBPMS2Q6ZRY4 209 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 NR2C2APQ86WQ0 139 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 STPG3Q8N7X2 389 aa16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 SDHCQ99643 169 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-201ENST00000341697 ZNF705AQ6ZN79 300 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 SEC11CQ9BY50 192 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 B4DEV8 164 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 SLC16A13Q7RTY0 426 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 COL25A1Q9BXS0 654 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 CFDP00746 253 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 AWAT1Q58HT5 328 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 BPIFA4PQ86YQ2 179 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 TMEM204Q9BSN7 226 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 HTN1P15515 57 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 DHRS11Q6UWP2 260 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 PRSS33Q8NF86 280 aa16.48■□□□□ 0.23
SEMA6C-201ENST00000341697 TMEM8BA6NDV4 472 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 LRRC75BQ2VPJ9 315 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 KIAA1324LA8MWY0 1029 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 CENPVQ7Z7K6 275 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 SLC25A28Q96A46 364 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 UFC1Q9Y3C8 167 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 AUP1Q9Y679 476 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 OR5AU1Q8NGC0 362 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 GTF3AQ92664 365 aaKnown RBP16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 GALNT14Q96FL9 552 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 EAF1Q96JC9 268 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 HAX1O00165 279 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 BCL2P10415 239 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 LOC102723971A0A1B0GUV8 181 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 ZNF735P0CB33 412 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 CCL3L1P16619 93 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 PQLC2Q6ZP29 291 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 LDLRAD3Q86YD5 345 aa16.47■□□□□ 0.23
SEMA6C-201ENST00000341697 FREM3P0C091 2139 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 UCP1P25874 307 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 TCL1AP56279 114 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 PAQR4Q8N4S7 273 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 ANGPTL6Q8NI99 470 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 TRAF4Q9BUZ4 470 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 LYNX1G3V0Z9 82 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 PLAUP00749 431 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 IGKV1D-33P01593 117 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 IGKV1-33P01594 117 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 LYNX1P0DP58 116 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 NHLH1Q02575 133 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 ZNF273Q14593 569 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms