RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CEBPZOSA8MTT3 80 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 IGKV3-15P01624 115 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 MPV17P39210 176 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 HNRNPA3P51991 378 aaKnown RBP12.67□□□□□ -0.38
BRAT1-201ENST00000340611 OR8B8Q15620 311 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 LGI3Q8N145 548 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 FBXL14Q8N1E6 418 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 DECR2Q9NUI1 292 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 SLC25A15Q9Y619 301 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 CCL21O00585 134 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 SSSCA1O60232 199 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 GRNP28799 593 aaKnown RBP12.66□□□□□ -0.38
BRAT1-201ENST00000340611 BMI1P35226 326 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 FABP6P51161 128 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 RBPJQ06330 500 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 MALLQ13021 153 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF596Q8TC21 504 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
BRAT1-201ENST00000340611 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
BRAT1-201ENST00000340611 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 PSG1P11464 419 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 CA6P23280 308 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 GPM6AP51674 278 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 PPP1CBP62140 327 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 WFDC12Q8WWY7 111 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
BRAT1-201ENST00000340611 MYO18BQ8IUG5 2567 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 FAM90A27PA6NNH2 459 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 DTYMKP23919 212 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 UBE2G2P60604 165 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 PRDX4Q13162 271 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 OR51G1Q8NGK1 321 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 PP6455Q8WZ26 134 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 CACNA1DQ01668 2161 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-201ENST00000340611 LOC102723971A0A1B0GUV8 181 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 UQCRFS1P47985 274 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 KRTDAPP60985 99 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 PIGYQ3MUY2 71 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 CXorf66Q5JRM2 361 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-201ENST00000340611 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 RND1Q92730 232 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 MAP1LC3B2A6NCE7 125 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 PNRC1Q12796 327 aaPredicted RBP12.65□□□□□ -0.39
BRAT1-201ENST00000340611 MSMPQ1L6U9 139 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 TMEM41BQ5BJD5 291 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 ACTL10Q5JWF8 245 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 OR4D5Q8NGN0 318 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 MAP1LC3BQ9GZQ8 125 aa12.65□□□□□ -0.39
BRAT1-201ENST00000340611 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF266Q14584 549 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 TMEM241Q24JQ0 296 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 ACOT6Q3I5F7 207 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-201ENST00000340611 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 Q6ZSR3 168 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 BORCS8Q96FH0 119 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 ATP5SQ99766 215 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 IGHV2OR16-5A0A0B4J2B6 119 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 IGKV1-12A0A0C4DH73 117 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 IGKV1D-12P01611 117 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 AADACP22760 399 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 DYNLT3P51808 116 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 PSG7Q13046 419 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-201ENST00000340611 TNFRSF14Q92956 283 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
BRAT1-201ENST00000340611 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-201ENST00000340611 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 LRTM2Q8N967 370 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 IGHV2-70DA0A0C4DH43 119 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 TMEM42Q69YG0 159 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 KLF14Q8TD94 323 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-201ENST00000340611 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 AKAP6Q13023 2319 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF462Q96JM2 2506 aa12.63□□□□□ -0.39
BRAT1-201ENST00000340611 PRB1P04280 392 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 NPBWR2P48146 333 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 HERV-K104P61576 105 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 ATOH7Q8N100 152 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 TMEM50AO95807 157 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 CA7P43166 264 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 ZNF154Q13106 437 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 TIMM23BQ5SRD1 257 aa12.62□□□□□ -0.39
BRAT1-201ENST00000340611 VKORC1Q9BQB6 163 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms