RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 MUC15Q8N387 334 aa12.4□□□□□ -0.42
RET-201ENST00000340058 FAM222BQ8WU58 562 aa12.4□□□□□ -0.42
RET-201ENST00000340058 CYYR1Q96J86 154 aa12.4□□□□□ -0.42
RET-201ENST00000340058 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
RET-201ENST00000340058 PRO1933Q9H354 126 aa12.4□□□□□ -0.42
RET-201ENST00000340058 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
RET-201ENST00000340058 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
RET-201ENST00000340058 TUBD1Q9UJT1 453 aa12.4□□□□□ -0.42
RET-201ENST00000340058 TCF19Q9Y242 345 aa12.4□□□□□ -0.42
RET-201ENST00000340058 CTXND1A0A1B0GTU2 59 aa12.4□□□□□ -0.42
RET-201ENST00000340058 E9PQ18 207 aa12.4□□□□□ -0.42
RET-201ENST00000340058 LDLRAD4O15165 306 aa12.4□□□□□ -0.42
RET-201ENST00000340058 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.42
RET-201ENST00000340058 SRD5A3Q9H8P0 318 aa12.4□□□□□ -0.42
RET-201ENST00000340058 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
RET-201ENST00000340058 KIF26AQ9ULI4 1882 aaPredicted RBP12.4□□□□□ -0.42
RET-201ENST00000340058 FCN1O00602 326 aa12.39□□□□□ -0.43
RET-201ENST00000340058 GNG7O60262 68 aa12.39□□□□□ -0.43
RET-201ENST00000340058 RAB5AP20339 215 aa12.39□□□□□ -0.43
RET-201ENST00000340058 TMPRSS3P57727 454 aa12.39□□□□□ -0.43
RET-201ENST00000340058 SUPT4H1P63272 117 aaKnown RBP12.39□□□□□ -0.43
RET-201ENST00000340058 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
RET-201ENST00000340058 YLPM1P49750 1951 aaKnown RBP12.39□□□□□ -0.43
RET-201ENST00000340058 PSPNO60542 156 aa12.39□□□□□ -0.43
RET-201ENST00000340058 CD55P08174 381 aa12.39□□□□□ -0.43
RET-201ENST00000340058 CEACAM3P40198 252 aa12.39□□□□□ -0.43
RET-201ENST00000340058 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
RET-201ENST00000340058 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
RET-201ENST00000340058 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
RET-201ENST00000340058 RNF115Q9Y4L5 304 aa12.39□□□□□ -0.43
RET-201ENST00000340058 BCL2P10415 239 aa12.39□□□□□ -0.43
RET-201ENST00000340058 UCP3P55916 312 aa12.39□□□□□ -0.43
RET-201ENST00000340058 LY6DQ14210 128 aa12.39□□□□□ -0.43
RET-201ENST00000340058 RPRMLQ8N4K4 120 aa12.39□□□□□ -0.43
RET-201ENST00000340058 MRPL37Q9BZE1 423 aaKnown RBP12.39□□□□□ -0.43
RET-201ENST00000340058 RAMP3O60896 148 aa12.39□□□□□ -0.43
RET-201ENST00000340058 PRB4P10163 310 aaPredicted RBP12.39□□□□□ -0.43
RET-201ENST00000340058 SRSF3P84103 164 aaKnown RBP12.39□□□□□ -0.43
RET-201ENST00000340058 GALNT14Q96FL9 552 aa12.39□□□□□ -0.43
RET-201ENST00000340058 TMSB15BA0A087X1C1 80 aa12.38□□□□□ -0.43
RET-201ENST00000340058 DUXBA0A1W2PPF3 345 aa12.38□□□□□ -0.43
RET-201ENST00000340058 UCP1P25874 307 aa12.38□□□□□ -0.43
RET-201ENST00000340058 DHRS7BQ6IAN0 325 aaPredicted RBP12.38□□□□□ -0.43
RET-201ENST00000340058 OR2T10Q8NGZ9 312 aa12.38□□□□□ -0.43
RET-201ENST00000340058 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
RET-201ENST00000340058 TXN2Q99757 166 aa12.38□□□□□ -0.43
RET-201ENST00000340058 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
RET-201ENST00000340058 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
RET-201ENST00000340058 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
RET-201ENST00000340058 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
RET-201ENST00000340058 IGKV3D-15A0A087WSY6 115 aa12.38□□□□□ -0.43
RET-201ENST00000340058 XKRY2A2RUG3 117 aa12.38□□□□□ -0.43
RET-201ENST00000340058 CD24P25063 80 aa12.38□□□□□ -0.43
RET-201ENST00000340058 RND2P52198 227 aa12.38□□□□□ -0.43
RET-201ENST00000340058 SPCS3P61009 180 aa12.38□□□□□ -0.43
RET-201ENST00000340058 WDR82Q6UXN9 313 aa12.38□□□□□ -0.43
RET-201ENST00000340058 NPVFQ9HCQ7 196 aa12.38□□□□□ -0.43
RET-201ENST00000340058 TECRQ9NZ01 308 aaKnown RBP12.38□□□□□ -0.43
RET-201ENST00000340058 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
RET-201ENST00000340058 IGHV1-18A0A0C4DH31 117 aa12.37□□□□□ -0.43
RET-201ENST00000340058 PGA5P0DJD9 388 aa12.37□□□□□ -0.43
RET-201ENST00000340058 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
RET-201ENST00000340058 SCGB2A2Q13296 93 aa12.37□□□□□ -0.43
RET-201ENST00000340058 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
RET-201ENST00000340058 NAT8Q9UHE5 227 aa12.37□□□□□ -0.43
RET-201ENST00000340058 ZDHHC8Q9ULC8 765 aa12.37□□□□□ -0.43
RET-201ENST00000340058 HSBP1O75506 76 aa12.37□□□□□ -0.43
RET-201ENST00000340058 RPL27AP46776 148 aaKnown RBP12.37□□□□□ -0.43
RET-201ENST00000340058 OR10G8Q8NGN5 311 aa12.37□□□□□ -0.43
RET-201ENST00000340058 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
RET-201ENST00000340058 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
RET-201ENST00000340058 FBLN5Q9UBX5 448 aa12.37□□□□□ -0.43
RET-201ENST00000340058 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
RET-201ENST00000340058 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
RET-201ENST00000340058 F2RL2O00254 374 aa12.37□□□□□ -0.43
RET-201ENST00000340058 CSN3P07498 182 aa12.37□□□□□ -0.43
RET-201ENST00000340058 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
RET-201ENST00000340058 OR8I2Q8N0Y5 310 aa12.37□□□□□ -0.43
RET-201ENST00000340058 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
RET-201ENST00000340058 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
RET-201ENST00000340058 HTTP42858 3142 aa12.37□□□□□ -0.43
RET-201ENST00000340058 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
RET-201ENST00000340058 LINC00869P0C866 280 aa12.36□□□□□ -0.43
RET-201ENST00000340058 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
RET-201ENST00000340058 SPACA3Q8IXA5 215 aa12.36□□□□□ -0.43
RET-201ENST00000340058 H1FOOQ8IZA3 346 aaPredicted RBP12.36□□□□□ -0.43
RET-201ENST00000340058 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
RET-201ENST00000340058 SLC35E4Q6ICL7 350 aa12.36□□□□□ -0.43
RET-201ENST00000340058 ZNF343Q6P1L6 599 aa12.36□□□□□ -0.43
RET-201ENST00000340058 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
RET-201ENST00000340058 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
RET-201ENST00000340058 LHFPL5Q8TAF8 219 aa12.36□□□□□ -0.43
RET-201ENST00000340058 DANCRP0C864 163 aa12.36□□□□□ -0.43
RET-201ENST00000340058 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
RET-201ENST00000340058 ARL16Q0P5N6 197 aa12.36□□□□□ -0.43
RET-201ENST00000340058 PMS2P11Q13670 270 aa12.36□□□□□ -0.43
RET-201ENST00000340058 RNF212Q495C1 297 aa12.36□□□□□ -0.43
RET-201ENST00000340058 PDPNQ86YL7 162 aa12.36□□□□□ -0.43
RET-201ENST00000340058 PNKDQ8N490 385 aa12.36□□□□□ -0.43
RET-201ENST00000340058 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms