RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 FAM25EA8MYX2 175 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 SMLR1H3BR10 107 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 SHOXO15266 292 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
CSRP1-201ENST00000340006 HOXB5P09067 269 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 NKX2-5P52952 324 aaPredicted RBP11.87□□□□□ -0.51
CSRP1-201ENST00000340006 ZFP69Q49AA0 526 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 RBMS3Q6XE24 437 aaKnown RBP11.87□□□□□ -0.51
CSRP1-201ENST00000340006 ZNF695Q8IW36 515 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 LGI3Q8N145 548 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 LRTM2Q8N967 370 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
CSRP1-201ENST00000340006 WDR89Q96FK6 387 aaPredicted RBP11.87□□□□□ -0.51
CSRP1-201ENST00000340006 MAST4O15021 2626 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 HPRT1P00492 218 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 UCP1P25874 307 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 BRWD1-AS2P59051 145 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 SRPXP78539 464 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 LRRC75BQ2VPJ9 315 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 OR4C13Q8NGP0 309 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 OR2T35Q8NGX2 323 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 CFHR4Q92496 578 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 PDCD10Q9BUL8 212 aa11.86□□□□□ -0.51
CSRP1-201ENST00000340006 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 H3BUX3 64 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 MOSP00540 346 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 RAP2BP61225 183 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 VENTXO95231 258 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 CDS2O95674 445 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 KRASP01116 189 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 RPA2P15927 270 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 DHRS7BQ6IAN0 325 aaPredicted RBP11.85□□□□□ -0.51
CSRP1-201ENST00000340006 GSG1LQ6UXU4 331 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 LYZL2Q7Z4W2 148 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 SLC35G3Q8N808 338 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 SEC22AQ96IW7 307 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 RITA1Q96K30 269 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 TMEM56Q96MV1 263 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 TMEM56-RWDD3S4R434 201 aa11.85□□□□□ -0.51
CSRP1-201ENST00000340006 BTBD17A6NE02 478 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 IFNA21P01568 189 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 C1QBP02746 253 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 TMEM11P17152 192 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 HABP2Q14520 560 aaPredicted RBP11.84□□□□□ -0.51
CSRP1-201ENST00000340006 LY6EQ16553 131 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 Q6YL49 198 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 SIGLECL1Q8N7X8 197 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 RNASE11Q8TAA1 199 aaKnown RBP11.84□□□□□ -0.51
CSRP1-201ENST00000340006 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
CSRP1-201ENST00000340006 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
CSRP1-201ENST00000340006 NCBP2LA6PVI3 153 aaKnown RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 S1PR2O95136 353 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 HRASP01112 189 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 IER3P46695 156 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 RBPMSQ93062 196 aaKnown RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 AIFM2Q9BRQ8 373 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 ATG12O94817 140 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 NQO2P16083 231 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 G6PCP35575 357 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 LGALS7P47929 136 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 DYNLT3P51808 116 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 SRSF4Q08170 494 aaKnown RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 AANATQ16613 207 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 Q5BKY6 102 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
CSRP1-201ENST00000340006 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
CSRP1-201ENST00000340006 G3V3Q6 166 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 RGS13O14921 159 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
CSRP1-201ENST00000340006 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 AKR1C2P52895 323 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms