RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 MRPL20Q9BYC9 149 aaKnown RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 GAPDHP04406 335 aaKnown RBP11.13□□□□□ -0.63
USP47-202ENST00000339865 CGB7P0DN87 165 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 H3BTX0 84 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 NALCNQ8IZF0 1738 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 RPS11P62280 158 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP47-202ENST00000339865 IGLV3-10A0A075B6K4 115 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 COL10A1Q03692 680 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 LOC390937A0A1W2PQ73 354 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
USP47-202ENST00000339865 PSG9Q00887 426 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 ZBTB34Q8NCN2 500 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 CGB3P0DN86 165 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
USP47-202ENST00000339865 MC5RP33032 325 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 ZNF124Q15973 351 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP47-202ENST00000339865 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 hCG_38984A0A1B0GV85 526 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 HPRT1P00492 218 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 SELENOTP62341 195 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 WDR82Q6UXN9 313 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 PRRT4C9JH25 899 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 PRR35P0CG20 571 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 ZNF257Q9Y2Q1 563 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
USP47-202ENST00000339865 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 SOX8P57073 446 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 VKORC1Q9BQB6 163 aa11.12□□□□□ -0.63
USP47-202ENST00000339865 NCOA6Q14686 2063 aaPredicted RBP11.11□□□□□ -0.63
USP47-202ENST00000339865 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 P2RY4P51582 365 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 ZNF488Q96MN9 340 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 SORL1Q92673 2214 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 A8MWV9 139 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 CDC42EP2O14613 210 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 CFAP161Q6P656 301 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 MGST2Q99735 147 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 PEX7O00628 323 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
USP47-202ENST00000339865 SYNGR3O43761 229 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 CRPP02741 224 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 RNF7Q9UBF6 113 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.11□□□□□ -0.63
USP47-202ENST00000339865 PNLIPP16233 465 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 GPR183P32249 361 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 TIMM23BQ5SRD1 257 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 NPIPB4C9JG80 1138 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 THY1P04216 161 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 NMBP08949 121 aa11.11□□□□□ -0.63
USP47-202ENST00000339865 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 TSPOP30536 169 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 FGF5P12034 268 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 RND3P61587 244 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 ZNF645Q8N7E2 425 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 COQ2Q96H96 371 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 CLPSP04118 112 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 FUT5Q11128 374 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 C2CD4DB7Z1M9 353 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 PRTN3P24158 256 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
USP47-202ENST00000339865 GAGE13Q4V321 117 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 LINC00596Q86U02 117 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 A0A1B0GTL3 188 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 C3AR1Q16581 482 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 GPHA2Q96T91 129 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
USP47-202ENST00000339865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms