RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OBP2BQ9NPH6 170 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 GAGE2DQ9UEU5 116 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 DUSP13Q9UII6 198 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 A0A0B4J2E0 115 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 A0A1B0GX12 115 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 A0A1W2PP11 408 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 FAM90A27PA6NNH2 459 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 RHODO00212 210 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 HERV-K104P61576 105 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 CX3CL1P78423 397 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 PRR31Q5SQ13 230 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 MRPL2Q5T653 305 aaKnown RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 OTPQ5XKR4 325 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 Q6ZS92 163 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 SCAMP5Q8TAC9 235 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 ARHGAP5-AS1Q96IT6 56 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 CFHR5Q9BXR6 569 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 TP73-AS1Q9UF72 201 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 OR2W1Q9Y3N9 320 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 HILPDAQ9Y5L2 63 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 A0A0D9SEW6 157 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 PRSS29PA6NIE9 313 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 OR5AL1P0C617 328 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 SRD5A1P18405 259 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 BLVRBP30043 206 aaPredicted RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 LTBRP36941 435 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 SLC35B1P78383 322 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 ID3Q02535 119 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 ZPLD1Q8TCW7 415 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 ARPC1AQ92747 370 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 SRSF8Q9BRL6 282 aaKnown RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 OR10A2Q9H208 303 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 ABT1Q9ULW3 272 aaKnown RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 PLXNB3Q9ULL4 1909 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 F5H768 121 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 CHST1O43916 411 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 NDUFB4O95168 129 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 CLDN7O95471 211 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 GABRG2P18507 467 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 PEBP1P30086 187 aaKnown RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 KLF5Q13887 457 aaPredicted RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 SLC25A47Q6Q0C1 308 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 PRSS41Q7RTY9 318 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 H2BFWTQ7Z2G1 175 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 LRRC75A-AS1Q8N1F1 130 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 ZNF114Q8NC26 417 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 OR4C12Q96R67 309 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 TRAV36DV7A0A075B6V5 113 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 LOC107986453A0A1B0GWG9 222 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 C17orf102A2RUQ5 167 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 E9PLN8 166 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 MOSP00540 346 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 GLRXP35754 106 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 FOXG1P55316 489 aaPredicted RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 DPTQ07507 201 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 PRR22Q8IZ63 422 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 SLC35A4Q96G79 324 aa7.25□□□□□ -1.25
TDP1-201ENST00000335725 ZNF331Q9NQX6 463 aaPredicted RBP7.25□□□□□ -1.25
TDP1-201ENST00000335725 LEPROTL1O95214 131 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 CA3P07451 260 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 FCGR2BP31994 310 aaPredicted RBP7.24□□□□□ -1.25
TDP1-201ENST00000335725 TAS2R45P59539 299 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 OR5AN1Q8NGI8 311 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 GTSF1Q8WW33 167 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 DOCK4Q8N1I0 1966 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 PLXNA4Q9HCM2 1894 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 A0A1B0GWA3 101 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 TMEM50BP56557 158 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 GNB1P62873 340 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 MRPS6P82932 125 aaKnown RBP7.24□□□□□ -1.25
TDP1-201ENST00000335725 ZNF501Q96CX3 271 aaPredicted RBP7.24□□□□□ -1.25
TDP1-201ENST00000335725 WNT6Q9Y6F9 365 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 GREB1Q4ZG55 1949 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 PTGESO14684 152 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 CLDN17P56750 224 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 RHOAP61586 193 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
TDP1-201ENST00000335725 R4GMQ9 66 aa7.24□□□□□ -1.25
TDP1-201ENST00000335725 J3KT08 172 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 RHOCP08134 193 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 COX5AP20674 150 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 CST5P28325 142 aaPredicted RBP7.23□□□□□ -1.25
TDP1-201ENST00000335725 EFEMP1Q12805 493 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 PHLDA2Q53GA4 152 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 PRR30Q53SZ7 412 aaPredicted RBP7.23□□□□□ -1.25
TDP1-201ENST00000335725 SLC25A53Q5H9E4 307 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 C8orf46Q8TAG6 207 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 GOLGA2P5Q9HBQ8 144 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 LINC01553A4QN01 128 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 B3GALT2O43825 422 aa7.23□□□□□ -1.25
TDP1-201ENST00000335725 ZIC2O95409 532 aaPredicted RBP7.23□□□□□ -1.25
TDP1-201ENST00000335725 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms