RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 LGALS4P56470 323 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 PSG7Q13046 419 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 OR5AU1Q8NGC0 362 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 OR10S1Q8NGN2 331 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 MOB3AQ96BX8 217 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 Q96M66 194 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 TCF21O43680 179 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 NDUFB4O95168 129 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 HOXA5P20719 270 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 GPR6P46095 362 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 ATP5J2P56134 94 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 CCL20P78556 96 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 PRR14LQ5THK1 2151 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 SPNS3Q6ZMD2 512 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 LYRM2Q9NU23 88 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 CREBBPQ92793 2442 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 EDARADDQ8WWZ3 215 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 A0A1B0GU03 582 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 SNURFLB1AK76 121 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 GNG4P50150 75 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 TAS2R45P59539 299 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 SCGB2A2Q13296 93 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 CLEC2AQ6UVW9 174 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 RNF144BQ7Z419 303 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 REC114Q7Z4M0 266 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.81
HDAC6-201ENST00000334136 CYTL1Q9NRR1 136 aa9.96□□□□□ -0.81
HDAC6-201ENST00000334136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.96□□□□□ -0.813e-8■■■□□ 16.1
HDAC6-201ENST00000334136 IGKV1D-8A0A087WSZ0 117 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 LOC390937A0A1W2PQ73 354 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 OR10J1P30954 320 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF826PQ6ZT77 177 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 SLC35E1Q96K37 410 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 RALYQ9UKM9 306 aaKnown RBP9.96□□□□□ -0.82
HDAC6-201ENST00000334136 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 FASNP49327 2511 aaKnown RBP9.96□□□□□ -0.82
HDAC6-201ENST00000334136 PPIAL4EA0A075B759 164 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 CTXND1A0A1B0GTU2 59 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 PPIAL4DF5H284 164 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 CHEK1O14757 476 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 PPIAL4FP0DN26 164 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 TPRX1Q8N7U7 411 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF596Q8TC21 504 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 ANAPC16Q96DE5 110 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF319Q9P2F9 582 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 PPIAL4AQ9Y536 164 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
HDAC6-201ENST00000334136 hCG_38984A0A1B0GV85 526 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 GRIFINA4D1Z8 144 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 UBE2CO00762 179 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
HDAC6-201ENST00000334136 TMEM11P17152 192 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 MPV17P39210 176 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 PMELP40967 661 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF818PQ6ZRF7 136 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 WDR31Q8NA23 367 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 SRD5A3Q9H8P0 318 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
HDAC6-201ENST00000334136 ASPHD2Q6ICH7 369 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 NOL4LQ96MY1 436 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-201ENST00000334136 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 IL19Q9UHD0 177 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 HRASP01112 189 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 SERF2P84101 59 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 CCL19Q99731 98 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
HDAC6-201ENST00000334136 TRGV10A0A0A0MS01 117 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 CRYGSP22914 178 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 CD81P60033 236 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 SUPT4H1P63272 117 aaKnown RBP9.94□□□□□ -0.82
HDAC6-201ENST00000334136 SLC31A2O15432 143 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
HDAC6-201ENST00000334136 OR4P4Q8NGL7 312 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 CORO2AQ92828 525 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF835Q9Y2P0 537 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 A0A0A6YYD4 124 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 IGKV1-9A0A0C4DH69 117 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 LOC102723971A0A1B0GUV8 181 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 C9JQL5 133 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 PGLYRP1O75594 196 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-201ENST00000334136 CD5P06127 495 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms