RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PFDN5Q99471 154 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 CCL13Q99616 98 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 ZNF665Q9H7R5 613 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 GFOD1Q9NXC2 390 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 DCAF16Q9NXF7 216 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 IFITM10A6NMD0 228 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 ITGB1BP1O14713 200 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 RBFOX2O43251 390 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX28-201ENST00000332395 SRP19P09132 144 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 OR4A8P0C604 315 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 RAB7AP51149 207 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 CCL8P80075 99 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 ZNF726P1Q15940 193 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 ATP6V1FQ16864 119 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 C9orf152Q5JTZ5 239 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 ZNF788Q6ZQV5 615 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 FAM216BQ8N7L0 139 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 QTRT1Q9BXR0 403 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 DYSFO75923 2080 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 HSPB1P04792 205 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 RD3LP0DJH9 198 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 TMEM41BQ5BJD5 291 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 SSX9Q7RTT3 188 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 OR10P1Q8NGE3 313 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 PINX1Q96BK5 328 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 RCC1LQ96I51 464 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 TMEM147Q9BVK8 224 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 UNKLQ9H9P5 680 aaKnown RBP14.37□□□□□ -0.11
DDX28-201ENST00000332395 TANC2Q9HCD6 1990 aa14.37□□□□□ -0.11
DDX28-201ENST00000332395 DOCK11Q5JSL3 2073 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 FAM90A9PA6NNJ1 464 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 GPX4P36969 197 aaPredicted RBP14.36□□□□□ -0.11
DDX28-201ENST00000332395 RPS10P46783 165 aaKnown RBP14.36□□□□□ -0.11
DDX28-201ENST00000332395 CT45A1Q5HYN5 189 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 PRAMEF5Q5TYX0 476 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 TEX36Q5VZQ5 186 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 ZNF787Q6DD87 383 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 C1orf229Q6ZS94 237 aaPredicted RBP14.36□□□□□ -0.11
DDX28-201ENST00000332395 SSX7Q7RTT5 188 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 CT45A3Q8NHU0 189 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 MBD3L1Q8WWY6 194 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 S1PR3Q99500 378 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 TIMM9Q9Y5J7 89 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 C17orf100A8MU93 164 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 TNFRSF1AP19438 455 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 ELLP55199 621 aaPredicted RBP14.36□□□□□ -0.11
DDX28-201ENST00000332395 AARDQ4LEZ3 155 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 KHDC3LQ587J8 217 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 LCN15Q6UWW0 184 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 DIRC2Q96SL1 478 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 GAB2Q9UQC2 676 aa14.36□□□□□ -0.11
DDX28-201ENST00000332395 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX28-201ENST00000332395 CEBPGP53567 150 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 RPS16P62249 146 aaKnown RBP14.35□□□□□ -0.11
DDX28-201ENST00000332395 CENPVQ7Z7K6 275 aaPredicted RBP14.35□□□□□ -0.11
DDX28-201ENST00000332395 VKORC1L1Q8N0U8 176 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 CYB561D1Q8N8Q1 229 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 DDB2Q92466 427 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 GNG13Q9P2W3 67 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 CEP295Q9C0D2 2601 aa14.35□□□□□ -0.11
DDX28-201ENST00000332395 SAA2-SAA4A0A096LPE2 208 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 LOC102723971A0A1B0GUV8 181 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 SAA2P0DJI9 122 aaPredicted RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 KIR2DS2P43631 304 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 ERVK-16P61578 105 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 HNF4GQ14541 408 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 ZCCHC24Q8N2G6 241 aaKnown RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 OR4A16Q8NH70 328 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 GAR1Q9NY12 217 aaKnown RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 HCFC1P51610 2035 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 S100A2P29034 98 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 FGF8P55075 233 aaPredicted RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 NDUFA6P56556 154 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 SSTP61278 116 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 DEFA6Q01524 100 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.34□□□□□ -0.11
DDX28-201ENST00000332395 DOK5Q9P104 306 aa14.34□□□□□ -0.11
DDX28-201ENST00000332395 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.11
DDX28-201ENST00000332395 TMPRSS2O15393 492 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 FAM87AP0C7U9 286 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 FGF7P21781 194 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 GNB2P62879 340 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 ZNF439Q8NDP4 499 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 OR4S2Q8NH73 311 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 LINC00574Q9H8X3 128 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 IDI2-AS1Q9NZ38 188 aa14.33□□□□□ -0.11
DDX28-201ENST00000332395 ZFP92A6NM28 416 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 C15orf62A8K5M9 175 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 H3BQ15 152 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 SPCS3P61009 180 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 VWC2Q2TAL6 325 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 CDPF1Q6NVV7 123 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 CORO2AQ92828 525 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 TMEM140Q9NV12 185 aa14.33□□□□□ -0.12
DDX28-201ENST00000332395 A0A087WWC5 75 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms