RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 IL6RP08887 468 aaPredicted RBP13.82□□□□□ -0.2
DDX41-201ENST00000330503 CAMLGP49069 296 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 F2RL1P55085 397 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 SPCS3P61009 180 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 AKR1C1Q04828 323 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 DIAPH2-AS1Q14236 149 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 PDLIM3Q53GG5 364 aaPredicted RBP13.82□□□□□ -0.2
DDX41-201ENST00000330503 OR4A47Q6IF82 309 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 OR52E5Q8NH55 327 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 ST6GALNAC6Q969X2 333 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 RAB39BQ96DA2 213 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 CIB3Q96Q77 187 aaPredicted RBP13.82□□□□□ -0.2
DDX41-201ENST00000330503 PPIHO43447 177 aaKnown RBP13.82□□□□□ -0.2
DDX41-201ENST00000330503 IFNA5P01569 189 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 IFNA17P01571 189 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 IGFBP2P18065 325 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 HBG1P69891 147 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 HBG2P69892 147 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 SLC38A11Q08AI6 406 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 OR8G2PQ6IF36 304 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 THNSL2Q86YJ6 484 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 SLC35D1Q9NTN3 355 aa13.82□□□□□ -0.2
DDX41-201ENST00000330503 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 PRH1P02810 166 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 LRRC75BQ2VPJ9 315 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
DDX41-201ENST00000330503 ABHD12Q8N2K0 398 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 OR13D1Q8NGV5 346 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 TET2Q6N021 2002 aaPredicted RBP13.81□□□□□ -0.2
DDX41-201ENST00000330503 GPR37O15354 613 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
DDX41-201ENST00000330503 RPS16P62249 146 aaKnown RBP13.81□□□□□ -0.2
DDX41-201ENST00000330503 ZNF429Q86V71 674 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 OR10X1Q8NGY0 326 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 OR9G1Q8NH87 305 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 NARFLQ9H6Q4 476 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 MIOXQ9UGB7 285 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 FAM96BQ9Y3D0 163 aa13.81□□□□□ -0.2
DDX41-201ENST00000330503 TMEM218A2RU14 115 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 C15orf62A8K5M9 175 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 UMAD1C9J7I0 102 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 H0YJW9 148 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 AGPAT2O15120 278 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 HRASP01112 189 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 REG1BP48304 166 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 DLX1P56177 255 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 ZNF616Q08AN1 781 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 LILRB2Q8N423 598 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 OR5AN1Q8NGI8 311 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 C8orf46Q8TAG6 207 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 FAM213BQ8TBF2 198 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 RAB1CQ92928 201 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 NEIL1Q96FI4 390 aaPredicted RBP13.8□□□□□ -0.2
DDX41-201ENST00000330503 TMEM231Q9H6L2 316 aa13.8□□□□□ -0.2
DDX41-201ENST00000330503 C15orf61A6NNL5 157 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 OR8B3Q8NGG8 313 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 SCGB1C1Q8TD33 95 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 TMEM186Q96B77 213 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 RSG1Q9BU20 258 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 SCRT1Q9BWW7 348 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 UBTD1Q9HAC8 227 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 TCF19Q9Y242 345 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 FBXO7Q9Y3I1 522 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 ARG1P05089 322 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 OR8U8P0C7N1 319 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 ZNF137PP52743 207 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 GNB2P62879 340 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 FAM71F2Q6NXP2 309 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 NABP2Q9BQ15 211 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 WDR61Q9GZS3 305 aaKnown RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 NUP50Q9UKX7 468 aa13.79□□□□□ -0.2
DDX41-201ENST00000330503 FOXA2Q9Y261 457 aaPredicted RBP13.79□□□□□ -0.2
DDX41-201ENST00000330503 PPIAL4CA0A0B4J2A2 164 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 TSPAN15O95858 294 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
DDX41-201ENST00000330503 CD5P06127 495 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 PPIAL4GP0DN37 164 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 MYOD1P15172 320 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 SNCAP37840 140 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 CDKN1AP38936 164 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
DDX41-201ENST00000330503 SLC25A24Q6NUK1 477 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 TIMD4Q96H15 378 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 MS4A7Q9GZW8 240 aaPredicted RBP13.78□□□□□ -0.2
DDX41-201ENST00000330503 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 UPK2O00526 184 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 NDUFS7O75251 213 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
DDX41-201ENST00000330503 PRB3Q04118 309 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms