RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DCAF10Q5QP82 559 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 SSMEM1Q8WWF3 244 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 SFRP2Q96HF1 295 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 KIR2DL5BA0A0G2JN68 375 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 KIR2DL5BA0A0G2JPC4 375 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A10PA6NDY2 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A18PA6NE21 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A16PA6NEW6 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A20PA6NIJ5 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A8PA6NJQ4 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A7PA6NKC0 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A22PA8MWA6 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A12PA8MX19 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A5PA8MXJ8 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A23PA8MXZ1 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FCN1O00602 326 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 CDIPTO14735 213 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 SYNGR4O95473 234 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A15PP0C7V4 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A13PP0C7W8 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A14PP0C7W9 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 FAM90A24PP0C7X0 464 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 SFTPCP11686 197 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 PMCHP20382 165 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TCL1AP56279 114 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TPPP2P59282 170 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 Q6ZVH6 145 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 KIR2DL5AQ8N109 375 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 C11orf42Q8N5U0 333 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 OR2J1Q9GZK6 312 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 OPN3Q9H1Y3 402 aaPredicted RBP6.62□□□□□ -1.35
VMA21-201ENST00000330374 RIMS4Q9H426 269 aaPredicted RBP6.62□□□□□ -1.35
VMA21-201ENST00000330374 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TRBV20OR9-2A0A075B6H5 130 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 PINLYPA6NC86 204 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 FAM166BA8MTA8 275 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 AGFG2O95081 481 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 CD82P27701 267 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 RNPS1Q15287 305 aaKnown RBP6.61□□□□□ -1.35
VMA21-201ENST00000330374 MSMO1Q15800 293 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 HLA-DRB5Q30154 266 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 ASPHD1Q5U4P2 390 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 SPINK14Q6IE38 97 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 H2BFWTQ7Z2G1 175 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 APOBEC3DQ96AK3 386 aaPredicted RBP6.61□□□□□ -1.35
VMA21-201ENST00000330374 MRPL18Q9H0U6 180 aaKnown RBP6.61□□□□□ -1.35
VMA21-201ENST00000330374 NGBQ9NPG2 151 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 ELOVL5Q9NYP7 299 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 LRP5LA4QPB2 252 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 ARL14EPLP0DKL9 152 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 GNG3P63215 75 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 MMDQ15546 238 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 IMMP1LQ96LU5 166 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 SPXQ9BT56 116 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 MRPS17Q9Y2R5 130 aaKnown RBP6.61□□□□□ -1.35
VMA21-201ENST00000330374 IGHEP01854 428 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 SRD5A2P31213 254 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 PLP2Q04941 152 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 RNFT1Q5M7Z0 435 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 ZNF573Q86YE8 665 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 OR10G8Q8NGN5 311 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 OCC1Q8TAD7 63 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 R3HDM4Q96D70 268 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.61□□□□□ -1.35
VMA21-201ENST00000330374 KIAA1549Q9HCM3 1950 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 LRRC30A6NM36 301 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 BRS3P32247 399 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 AESQ08117 197 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 Q5PR19 223 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 MIC13Q5XKP0 118 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 OR5AU1Q8NGC0 362 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 OR1L6Q8NGR2 347 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 RNF114Q9Y508 228 aa6.61□□□□□ -1.35
VMA21-201ENST00000330374 SNURFLB1AK76 121 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 TYMSP04818 313 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 KRTAP27-1Q3LI81 207 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
VMA21-201ENST00000330374 MRGPRDQ8TDS7 321 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 FOXJ2Q9P0K8 574 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 TP53TG3Q9ULZ0 132 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 ZDBF2Q9HCK1 2354 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 C17orf112F2Z3M2 114 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 SH2D1BO14796 132 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 VENTXO95231 258 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 WNT2P09544 360 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 LCN2P80188 198 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 PDLIM3Q53GG5 364 aaPredicted RBP6.6□□□□□ -1.35
VMA21-201ENST00000330374 HES7Q9BYE0 225 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 DNAJC4Q9NNZ3 241 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 NCOR1O75376 2440 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 KLF7O75840 302 aaPredicted RBP6.6□□□□□ -1.35
VMA21-201ENST00000330374 NTF3P20783 257 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 GABRA2P47869 451 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 CAMPP49913 170 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms