RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 LINC00052Q96N35 136 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 DKK4Q9UBT3 224 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 OR51B2Q9Y5P1 312 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SLC25A17O43808 307 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CEACAM4O75871 244 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CEACAM8P31997 349 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CA7P43166 264 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 HMGN3Q15651 99 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 Q56UQ5 140 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SPNS3Q6ZMD2 512 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 Q6ZR03 302 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 AQP10Q96PS8 301 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 WIPF3A6NGB9 483 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SIGLEC5O15389 551 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CFPP27918 469 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CSN1S1P47710 185 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 ERVFRD-1P60508 538 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 HABP2Q14520 560 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SSX2Q16385 188 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CLEC12BQ2HXU8 276 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 NHLRC3Q5JS37 347 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 MARVELD3Q96A59 401 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 DMRT1Q9Y5R6 373 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 H0YIZ8 118 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 K7EQM0 130 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 KIAA0141Q14154 515 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 ADIPOQQ15848 244 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 ACSM6Q6P461 480 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 PNKDQ8N490 385 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 OR2T6Q8NHC8 308 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF596Q8TC21 504 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 NEIL1Q96FI4 390 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 GOSR1O95249 250 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 IGLV3-1P01715 115 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 MPZP25189 248 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 TNFRSF9Q07011 255 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 ASCL4Q6XD76 172 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 WDR86Q86TI4 376 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 PATZ1Q9HBE1 687 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 C1RLQ9NZP8 487 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 WSB1Q9Y6I7 421 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 SZT2Q5T011 3432 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 RNF222A6NCQ9 220 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 PLAUP00749 431 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 ATP6V1FQ16864 119 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 Q6P435 159 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 OR9G1Q8NH87 305 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 MED12LQ86YW9 2145 aa7.77□□□□□ -1.17
TMEM39A-201ENST00000319172 YLPM1P49750 1951 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 A0A1W2PN81 502 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF320A2RRD8 509 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 TOX4O94842 621 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 CHRNA7P36544 502 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 TAS2R45P59539 299 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF324BQ6AW86 544 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 LYRM2Q9NU23 88 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 THYN1Q9P016 225 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 MIOXQ9UGB7 285 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 IGKV3-7A0A075B6H7 116 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 RAMP3O60896 148 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 GAPDHP04406 335 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 BMI1P35226 326 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 CDC34P49427 236 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 FHITP49789 147 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 UBE2G1P62253 170 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 HCP5Q6MZN7 132 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 SMIM15Q7Z3B0 74 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 ST6GALNAC3Q8NDV1 305 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 IL22RA2Q969J5 263 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 SH3BGRL3Q9H299 93 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 LOC105371242A0A075B767 164 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 MDFIC2A0A1B0GVS7 189 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 ORM2P19652 201 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 OR4C12Q96R67 309 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 RNF126Q9BV68 326 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 TLNRD1Q9H1K6 362 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 SMCO4Q9NRQ5 59 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 NAV2Q8IVL1 2488 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 ZFYVE26Q68DK2 2539 aa7.76□□□□□ -1.17
TMEM39A-201ENST00000319172 IGHV3OR16-10A0A075B7F0 116 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 A0A1B0GWJ7 208 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LINC00862A6NCI5 91 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 TRIM77I1YAP6 450 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 PITX3O75364 302 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 CLN5O75503 358 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 SNRPCP09234 159 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 DVL1P1P54792 670 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 SPCS3P61009 180 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 RND3P61587 244 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms