RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 SLC25A33Q9BSK2 321 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 POLEQ07864 2286 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 RNASEK-C17orf49H0YIS7 233 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 SLC25A5P05141 298 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 RELL2Q8NC24 303 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 CD8AP01732 235 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 UCP1P25874 307 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 BTCP35070 178 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 NKX2-5P52952 324 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 MINOS1Q5TGZ0 78 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 SYT8Q8NBV8 401 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 C5orf66Q9H5L9 145 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 CACNG5Q9UF02 275 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 HIGD1AQ9Y241 93 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 UFC1Q9Y3C8 167 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 MINOS1-NBL1R4GNA1 71 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 TRAV24A0A0B4J272 114 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 SCTP09683 121 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 ADIPOQQ15848 244 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 ZNF343Q6P1L6 599 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 MED9Q9NWA0 146 aa7.17□□□□□ -1.26
PDLIM5-201ENST00000317968 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 CCSO14618 274 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 FXYD3Q14802 87 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 FAM122CQ6P4D5 195 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 COMMD1Q8N668 190 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 MMP24Q9Y5R2 645 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 GTF3C1Q12789 2109 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 ESPL1Q14674 2120 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 KBTBD11-OT1A0A1B0GTJ5 212 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 SLC25A17O43808 307 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 CTRB1P17538 263 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 TMEM155Q4W5P6 130 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 CTRB2Q6GPI1 263 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 PDPNQ86YL7 162 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 TECRQ9NZ01 308 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 F5H697 171 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 M0R1W7 72 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 ORM2P19652 201 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 SEM1Q6ZVN7 128 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 JKAMPQ9P055 326 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 C20orf202A1L168 122 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 C5orf63A6NC05 138 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 C12orf77C9JDV5 145 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 MLNRO43193 412 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 PTBP3O95758 552 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 SSX7Q7RTT5 188 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 PPP1R27Q86WC6 154 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 C16orf92Q96LL3 132 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 SLC25A22Q9H936 323 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 EXPH5Q8NEV8 1989 aa7.16□□□□□ -1.26
PDLIM5-201ENST00000317968 UBE2L5PA0A1B0GUS4 154 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 RGS13O14921 159 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 ADAP1O75689 374 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 ZP3P21754 424 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 GCSHP23434 173 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 RPL30P62888 115 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 S100A12P80511 92 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 IGSF11Q5DX21 431 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 Q6P435 159 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 MEX3AA1L020 520 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 AP4M1O00189 453 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 CHD7Q9P2D1 2997 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 NAGKQ9UJ70 344 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 RNF223E7ERA6 249 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 H0YL77 283 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 K7EM74 188 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 OR11H7Q8NGC8 314 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 RBM14Q96PK6 669 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 SAV1Q9H4B6 383 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 MBNL3Q9NUK0 354 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 KPTNQ9Y664 436 aa7.15□□□□□ -1.26
PDLIM5-201ENST00000317968 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 SYNGR2O43760 224 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 PGLYRP1O75594 196 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 SELENOTP62341 195 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 OR2C3Q8N628 320 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 CLEC5AQ9NY25 188 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 TRAV40A0A0B4J280 105 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 F12P00748 615 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 CD5P06127 495 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 FOSL1P15407 271 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 RCC1P18754 421 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 NPY1RP25929 384 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 C10orf113Q5VZT2 155 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 DTD1Q8TEA8 209 aa7.15□□□□□ -1.27
PDLIM5-201ENST00000317968 FAM90A9PA6NNJ1 464 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 F8W036 122 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 NPPCP23582 126 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MAS1LP35410 378 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 LY6G6FQ5SQ64 297 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 SIGIRRQ6IA17 410 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms