RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF705DP0CH99 300 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF705BP0CI00 300 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 MDKP21741 143 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 CNN1P51911 297 aaKnown RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 Q6ZS49 121 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 LINC00596Q86U02 117 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 MRPL30Q8TCC3 161 aaKnown RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 RDH5Q92781 318 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 ELOVL1Q9BW60 279 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 HES4Q9HCC6 221 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 LYRM2Q9NU23 88 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 LAMP3Q9UQV4 416 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 PCNX1Q96RV3 2341 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 MAP1LC3B2A6NCE7 125 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 HS3ST1O14792 307 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 WNT9BO14905 357 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 MMP23AO75900 390 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 NDUFB8O95169 186 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 GZMHP20718 246 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 GCH1P30793 250 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 RAB11AP62491 216 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 LYG1Q8N1E2 194 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 C18orf12Q96KH6 178 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
CPNE1-201ENST00000317677 MAP1LC3BQ9GZQ8 125 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 MAGT1Q9H0U3 335 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 CXXC4Q9H2H0 198 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM106BQ9NUM4 274 aa10.91□□□□□ -0.66
CPNE1-201ENST00000317677 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
CPNE1-201ENST00000317677 IGKV1-6A0A0C4DH72 117 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 THBDP07204 575 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 SCTP09683 121 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 CEBPDP49716 269 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-201ENST00000317677 GNB2P62879 340 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 PAFAH1B2P68402 229 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM187Q14656 261 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 SLC25A24Q6NUK1 477 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 WDR82Q6UXN9 313 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 OR5T1Q8NG75 326 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM37Q8WXS4 190 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 OR5B12Q96R08 314 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 FLNCQ14315 2725 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 SIRPB1O00241 398 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 SLC33A1O00400 549 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-201ENST00000317677 OR2H2O95918 312 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 TFF1P04155 84 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 BCL2P10415 239 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 GNMTQ14749 295 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF146Q15072 292 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.661e-7■□□□□ 9.8
CPNE1-201ENST00000317677 MAJINQ3KP22 176 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 MORN2Q502X0 79 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 TPTE2P1Q5T6R2 138 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 OR2C3Q8N628 320 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 HSPB7Q9UBY9 170 aa10.9□□□□□ -0.66
CPNE1-201ENST00000317677 LOC105371242A0A075B767 164 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 DEGS1O15121 323 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 HRASP01112 189 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 CRYAAP02489 173 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 AADACP22760 399 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 GLRXP35754 106 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 SRP14P37108 136 aaKnown RBP10.89□□□□□ -0.67
CPNE1-201ENST00000317677 TFPI2P48307 235 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 LCN2P80188 198 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-201ENST00000317677 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 C16orf82Q7Z2V1 217 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 CMTM1Q8IZ96 169 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 MBD3L1Q8WWY6 194 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 ABHD14BQ96IU4 210 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 PLEKHF2Q9H8W4 249 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 DUSP13Q9UII6 198 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
CPNE1-201ENST00000317677 SETXQ7Z333 2677 aaKnown RBP10.89□□□□□ -0.67
CPNE1-201ENST00000317677 LRRK2Q5S007 2527 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 IGLV3-9A0A075B6K5 115 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-201ENST00000317677 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 IGHV3-13P01766 116 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 ESDP10768 282 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 CD40P25942 277 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 GALR1P47211 349 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 FXYD4P59646 89 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 UBE2G2P60604 165 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 PRSS8Q16651 343 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 VHLLQ6RSH7 139 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 Q8IYB0 196 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 C1orf174Q8IYL3 243 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 OR4D5Q8NGN0 318 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 TOMM40LQ969M1 308 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 ANAPC16Q96DE5 110 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms