RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF295-AS1Q8N0V1 137 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 LFNGQ8NES3 379 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 TMEM37Q8WXS4 190 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 RND1Q92730 232 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 OR2W1Q9Y3N9 320 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 A0A0U1RQK1 487 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 IGLV2-14P01704 120 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 HBZP02008 142 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 GYPAP02724 150 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 HIST1H1BP16401 226 aaKnown RBP6.33□□□□□ -1.4
TRIM55-202ENST00000315962 ECI1P42126 302 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 PCP4P48539 62 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 CASP6P55212 293 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 TNFAIP6P98066 277 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-202ENST00000315962 C16orf54Q6UWD8 224 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 C1orf87Q8N0U7 546 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 GPR146Q96CH1 333 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 CCL13Q99616 98 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM204Q9BSN7 226 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 OR2D2Q9H210 308 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 LOC102723971A0A1B0GUV8 181 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 PGPEP1LA6NFU8 196 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 KRASP01116 189 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 IGHV1-46P01743 117 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 KITLGP21583 273 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 DLX1P56177 255 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-202ENST00000315962 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM108Q6UXF1 575 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 GALMQ96C23 342 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 C11orf1Q9H5F2 150 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 GCM1Q9NP62 436 aa6.33□□□□□ -1.4
TRIM55-202ENST00000315962 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 EREGO14944 169 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 SERPINE2P07093 398 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 GZMHP20718 246 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 GLRXP35754 106 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 NMSQ5H8A3 153 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF506Q5JVG8 444 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 TGIF2LXQ8IUE1 241 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 LRTM2Q8N967 370 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 OR4X1Q8NH49 305 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 PRR7Q8TB68 274 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 RCC1LQ96I51 464 aaKnown RBP6.32□□□□□ -1.4
TRIM55-202ENST00000315962 ATP5SQ99766 215 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 PSG11Q9UQ72 335 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A10PA6NDY2 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A18PA6NE21 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A16PA6NEW6 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A20PA6NIJ5 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A8PA6NJQ4 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A7PA6NKC0 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A22PA8MWA6 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A12PA8MX19 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A5PA8MXJ8 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A23PA8MXZ1 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 IGKV1D-33P01593 117 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A15PP0C7V4 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A13PP0C7W8 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A14PP0C7W9 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A24PP0C7X0 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 TLE4Q04727 773 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 ADIPOQQ15848 244 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 C16orf82Q7Z2V1 217 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 HAPLN4Q86UW8 402 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM90A1Q86YD7 464 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 VKORC1L1Q8N0U8 176 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 SMIM7Q9BQ49 75 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 WIPI2Q9Y4P8 454 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM208BQ5VWN6 2430 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 CDS2O95674 445 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 IFNA5P01569 189 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 AMBPP02760 352 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 HSPB1P04792 205 aaKnown RBP6.32□□□□□ -1.4
TRIM55-202ENST00000315962 BCL2P10415 239 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 CHRNA7P36544 502 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-202ENST00000315962 TAS2R30P59541 319 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 SELENOVP59797 346 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 AARDQ4LEZ3 155 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF66Q6ZN08 573 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 MRGPRGQ86SM5 289 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 Q8IYB0 196 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 H1FOOQ8IZA3 346 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-202ENST00000315962 GNG12Q9UBI6 72 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 FUT9Q9Y231 359 aa6.32□□□□□ -1.4
TRIM55-202ENST00000315962 POLQO75417 2590 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 MAP1LC3B2A6NCE7 125 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM210A6NLX4 147 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 TSTD3H0UI37 97 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 CLDN34H7C241 214 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms