RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SMIM27A0A1W2PRY6 76 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 WNT9BO14905 357 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 REG1AP05451 166 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L2P0CJ85 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L3P0CJ86 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L4P0CJ87 422 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L5P0CJ88 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L6P0CJ89 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L7P0CJ90 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 OPRK1P41145 380 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM267Q0VDI3 215 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 KRTCAP3Q53RY4 240 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 MORN5Q5VZ52 161 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4L9Q6RFH8 374 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 MRPL52Q86TS9 123 aaKnown RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 KLF14Q8TD94 323 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 TVP23CQ96ET8 276 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 DUX4Q9UBX2 424 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 POLR3KQ9Y2Y1 108 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 FBXO7Q9Y3I1 522 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 NPIPA3F8WFD2 350 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 SELEP16581 610 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 MFAP2P55001 183 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 LGALS4P56470 323 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 GNG3P63215 75 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF808Q8N4W9 903 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 MAGT1Q9H0U3 335 aa6.34□□□□□ -1.39
CNOT4-201ENST00000315544 LSM5Q9Y4Y9 91 aaKnown RBP6.34□□□□□ -1.39
CNOT4-201ENST00000315544 KNL1Q8NG31 2342 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 KIR2DS1A0A191URI9 304 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 IGHV3-13P01766 116 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 THBDP07204 575 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 NQO2P16083 231 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 KIR2DS4P43632 304 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 LCN2P80188 198 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.4
CNOT4-201ENST00000315544 Q0VG73 95 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 MALLQ13021 153 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 KIR2DS1Q14954 304 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 HLA-DRB5Q30154 266 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 TDRG1Q3Y452 100 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 GCSAMLQ5JQS6 135 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 LDLRAD2Q5SZI1 272 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 TEX38Q6PEX7 206 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 Q6ZWC4 215 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 UHRF2Q96PU4 802 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 SMIM3Q9BZL3 60 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 PARLQ9H300 379 aa6.34□□□□□ -1.4
CNOT4-201ENST00000315544 C11orf88Q6PI97 169 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 PATE2Q6UY27 113 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 MKXQ8IYA7 352 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 C9orf106Q8NAJ2 232 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 OR10G7Q8NGN6 311 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 BORCS8Q96FH0 119 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 RITA1Q96K30 269 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 GPR61Q9BZJ8 451 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 MMP23AO75900 390 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 TIMP3P35625 211 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 CT45A1Q5HYN5 189 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 PLCXD3Q63HM9 321 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 ZNF66Q6ZN08 573 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 CT45A3Q8NHU0 189 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 SNRNP40Q96DI7 357 aaKnown RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 CPNE2Q96FN4 548 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 ZNF701Q9NV72 531 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 SLC45A2Q9UMX9 530 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 C5orf49A4QMS7 147 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 CST7O76096 145 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 CCNOP22674 350 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 UBE2NP61088 152 aaKnown RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 FAM57AQ8TBR7 257 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 GFOD1Q9NXC2 390 aa6.33□□□□□ -1.4
CNOT4-201ENST00000315544 ERRFI1Q9UJM3 462 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-201ENST00000315544 IGHV2OR16-5A0A0B4J2B6 119 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 CYSRT1A8MQ03 144 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 CEBPDP49716 269 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-201ENST00000315544 EIF5AP63241 154 aaKnown RBP6.32□□□□□ -1.4
CNOT4-201ENST00000315544 TLE1Q04724 770 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 GAMTQ14353 236 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 RAET1LQ5VY80 246 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 Q8IYB0 196 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 CCDC71LQ8N9Z2 235 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 ZNF383Q8NA42 475 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 THAP8Q8NA92 274 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 OR4F17Q8NGA8 305 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 C1RLQ9NZP8 487 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 CACNG5Q9UF02 275 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 CR1P17927 2039 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 TRGV10A0A0A0MS01 117 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 F2Z2F3 143 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 TSPAN9O75954 239 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 GLI4P10075 376 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 IL3RAP26951 378 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 OR1C1Q15619 314 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 KRTAP21-3Q3LHN1 58 aa6.32□□□□□ -1.4
CNOT4-201ENST00000315544 ZNF474Q6S9Z5 364 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms