RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FAM90A15PP0C7V4 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A13PP0C7W8 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A14PP0C7W9 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A24PP0C7X0 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 LINC01590Q5TEZ4 76 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 TMEM116Q8NCL8 245 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 NRIP2Q9BQI9 281 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 NPFFR1Q9GZQ6 430 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 RBFOX3A6NFN3 312 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 HIST1H3AP68431 136 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 SSC4DQ8WTU2 575 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 RIGQ13278 110 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 ZIC4Q8N9L1 334 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 Q96M66 194 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 V9GYH0 126 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 K7ENP7 123 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 CCL3L1P16619 93 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 CXCL3P19876 107 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 DEDDO75618 318 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 PRSS1P07477 247 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 TIMP3P35625 211 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 Q0VFX4 171 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
RFFL-201ENST00000315249 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 SIP14410 1827 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 PRR30Q53SZ7 412 aaPredicted RBP11.43□□□□□ -0.58
RFFL-201ENST00000315249 COMMD1Q8N668 190 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 TM4SF5O14894 197 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 HSPE1P61604 102 aaKnown RBP11.43□□□□□ -0.58
RFFL-201ENST00000315249 BPIFA4PQ86YQ2 179 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 LRRC75AQ8NAA5 344 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 LSM10Q969L4 123 aaKnown RBP11.43□□□□□ -0.58
RFFL-201ENST00000315249 IQCF6A8MYZ5 107 aa11.43□□□□□ -0.58
RFFL-201ENST00000315249 ADAMTS9Q9P2N4 1935 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 ZFHX2Q9C0A1 2572 aaPredicted RBP11.42□□□□□ -0.58
RFFL-201ENST00000315249 NPIPB9F8W1W9 429 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 SYT8Q8NBV8 401 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 SLC25A33Q9BSK2 321 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 RSG1Q9BU20 258 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 EMP1P54849 157 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 HSF4Q9ULV5 492 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 OR10G8Q8NGN5 311 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 ZNF430Q9H8G1 570 aaPredicted RBP11.42□□□□□ -0.58
RFFL-201ENST00000315249 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 TCRBV4S1A1TA0A5B7 111 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 TFF1P04155 84 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 HTN3P15516 51 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 CD81P60033 236 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 H3BTX0 84 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
RFFL-201ENST00000315249 KIR2DL2P43627 348 aaPredicted RBP11.42□□□□□ -0.58
RFFL-201ENST00000315249 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
RFFL-201ENST00000315249 C1QL2Q7Z5L3 287 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 DRAM1Q8N682 238 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 TMEM18Q96B42 140 aa11.42□□□□□ -0.58
RFFL-201ENST00000315249 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 POC1AQ8NBT0 407 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 TBX6O95947 436 aaPredicted RBP11.41□□□□□ -0.58
RFFL-201ENST00000315249 CD1AP06126 327 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 ASPHD2Q6ICH7 369 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 LRP11Q86VZ4 500 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 NEURL2Q9BR09 285 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 GPX1P07203 203 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 SELENOTP62341 195 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 VAX2Q9UIW0 290 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 MRPL54Q6P161 138 aaKnown RBP11.41□□□□□ -0.58
RFFL-201ENST00000315249 TCTEX1D1Q8N7M0 179 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 IL4P05112 153 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 CLEC19AQ6UXS0 136 aa11.41□□□□□ -0.58
RFFL-201ENST00000315249 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
RFFL-201ENST00000315249 ABLIM2Q6H8Q1 611 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 GPR146Q96CH1 333 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 AMY1AP04745 511 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 MELTFP08582 738 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 GPR183P32249 361 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 PRSS33Q8NF86 280 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 C8orf46Q8TAG6 207 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 PHLDA3Q9Y5J5 127 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms