RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CST9LQ9H4G1 147 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 DEGS1O15121 323 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 IGLV2-14P01704 120 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 CELA2AP08217 269 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 OCIAD2Q56VL3 154 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 ZDHHC16Q969W1 377 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 RARRES3Q9UL19 164 aa15.16■□□□□ 0.02
SPSB4-201ENST00000310546 MRPS16Q9Y3D3 137 aaKnown RBP15.16■□□□□ 0.02
SPSB4-201ENST00000310546 USF3Q68DE3 2245 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 TNRC6BQ9UPQ9 1833 aaKnown RBP15.15■□□□□ 0.02
SPSB4-201ENST00000310546 RBMXL2O75526 392 aaKnown RBP15.15■□□□□ 0.02
SPSB4-201ENST00000310546 PRRX1P54821 245 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 LGALS4P56470 323 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 FGF12P61328 243 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 PSG7Q13046 419 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 MMD2Q8IY49 270 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 OR5A2Q8NGI9 324 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 BORCS7Q96B45 105 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 STRADBQ9C0K7 418 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 K7EN84 100 aa15.15■□□□□ 0.02
SPSB4-201ENST00000310546 SRSF7Q16629 238 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPSB4-201ENST00000310546 ZG16O60844 167 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF324O75467 553 aaPredicted RBP15.14■□□□□ 0.01
SPSB4-201ENST00000310546 MMP23AO75900 390 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF488Q96MN9 340 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
SPSB4-201ENST00000310546 LIN7CQ9NUP9 197 aaKnown RBP15.14■□□□□ 0.01
SPSB4-201ENST00000310546 MTCH1Q9NZJ7 389 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 COL5A1P20908 1838 aaPredicted RBP15.14■□□□□ 0.01
SPSB4-201ENST00000310546 A0A1W2PRS3 328 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 C17orf112F2Z3M2 114 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 PSG1P11464 419 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 CCNOP22674 350 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 G6PCP35575 357 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 STUMQ69YW2 141 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 ZIC4Q8N9L1 334 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF596Q8TC21 504 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 GMPPAQ96IJ6 420 aaPredicted RBP15.14■□□□□ 0.01
SPSB4-201ENST00000310546 CSTL1Q9H114 145 aa15.14■□□□□ 0.01
SPSB4-201ENST00000310546 TRAV30A0A087WSZ9 112 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 ARL14EPLP0DKL9 152 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 RPEL1Q2QD12 228 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 CLEC2AQ6UVW9 174 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 TP73-AS1Q9UF72 201 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 IGHV2-26A0A0B4J1V2 119 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 IGHV1-69-2A0A0G2JMI3 117 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 TRAPPC2LH3BP13 241 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 SRIP30626 198 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 RAET1LQ5VY80 246 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FGFBP3Q8TAT2 258 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF292O60281 2723 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A10PA6NDY2 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A18PA6NE21 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A16PA6NEW6 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A20PA6NIJ5 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A8PA6NJQ4 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A7PA6NKC0 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A22PA8MWA6 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A12PA8MX19 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A5PA8MXJ8 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A23PA8MXZ1 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 S1PR2O95136 353 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A15PP0C7V4 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A13PP0C7W8 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A14PP0C7W9 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A24PP0C7X0 464 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 NIT1Q86X76 327 aa15.13■□□□□ 0.01
SPSB4-201ENST00000310546 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 CACNA1DQ01668 2161 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 G3V3Y1 287 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 RAMP3O60896 148 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 CA2P00918 260 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 OTX2P32243 289 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 RPL31P62899 125 aaKnown RBP15.12■□□□□ 0.01
SPSB4-201ENST00000310546 ANKRD37Q7Z713 158 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 FAM58AQ8N1B3 248 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 OR56B2PQ8NGI1 322 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 CLEC7AQ9BXN2 247 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 IGLC7A0M8Q6 106 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 TCL1AP56279 114 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 RELBQ01201 579 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF816Q0VGE8 651 aaPredicted RBP15.12■□□□□ 0.01
SPSB4-201ENST00000310546 Q56UQ5 140 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 NFAM1Q8NET5 270 aaPredicted RBP15.12■□□□□ 0.01
SPSB4-201ENST00000310546 EXPH5Q8NEV8 1989 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 CORO2AQ92828 525 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 CRIM1Q9NZV1 1036 aa15.12■□□□□ 0.01
SPSB4-201ENST00000310546 EML6Q6ZMW3 1958 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 RNF212BA8MTL3 300 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 SP9P0CG40 484 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 ARF1P84077 181 aaKnown RBP15.11■□□□□ 0.01
SPSB4-201ENST00000310546 NUDT11Q96G61 164 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 SFXN3Q9BWM7 321 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 GNB1LQ9BYB4 327 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 PMS2P5A8MQ11 134 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 SYNGR1O43759 233 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 OR4A47Q6IF82 309 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 MKXQ8IYA7 352 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 OR2M7Q8NG81 312 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 DEPPQ9NTK1 212 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms