RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 ISLRO14498 428 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 APCSP02743 223 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 SFTPCP11686 197 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 MEGF10Q96KG7 1140 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 VPS25Q9BRG1 176 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 IGLV3-32A0A0A0MS00 114 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 CELA3BP08861 270 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 UCP1P25874 307 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 CLDN18P56856 261 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 ABLIM2Q6H8Q1 611 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 Q6ZN92 141 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 ACP7Q6ZNF0 438 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 GFI1Q99684 422 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
TMOD3-201ENST00000308580 ZFP36L1Q07352 338 aaKnown RBP8.41□□□□□ -1.06
TMOD3-201ENST00000308580 RNF222A6NCQ9 220 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 PGPA6NDG6 321 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 ARTNQ5T4W7 220 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
TMOD3-201ENST00000308580 COL6A6A6NMZ7 2263 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 WBP1Q96G27 269 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 RALGAPA1Q6GYQ0 2036 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 LHX2P50458 406 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 CORTO00230 105 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 HTN1P15515 57 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 GBGT1Q8N5D6 347 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 OR13A1Q8NGR1 328 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 SLC25A28Q96A46 364 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 GUCD1Q96NT3 240 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 IFNL4K9M1U5 179 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 REG1AP05451 166 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 IGHV1-2P23083 117 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 CD40P25942 277 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.06
TMOD3-201ENST00000308580 QTRT1Q9BXR0 403 aaKnown RBP8.4□□□□□ -1.06
TMOD3-201ENST00000308580 ARL14EPLP0DKL9 152 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 SMUG1Q53HV7 270 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 LYZL4Q96KX0 146 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 GSX1Q9H4S2 264 aaPredicted RBP8.4□□□□□ -1.07
TMOD3-201ENST00000308580 FREM3P0C091 2139 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 LRRC75BQ2VPJ9 315 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 ACSF3Q4G176 576 aaPredicted RBP8.4□□□□□ -1.07
TMOD3-201ENST00000308580 IBA57Q5T440 356 aaKnown RBP8.4□□□□□ -1.07
TMOD3-201ENST00000308580 C1QTNF12Q5T7M4 302 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 LINC01560Q8TB33 94 aa8.4□□□□□ -1.07
TMOD3-201ENST00000308580 TRAV14DV4A0A0A6YYC5 116 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 IGHV1-69-2A0A0G2JMI3 117 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 Q1RN00 199 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 C17orf82Q86X59 251 aaPredicted RBP8.39□□□□□ -1.07
TMOD3-201ENST00000308580 PAQR4Q8N4S7 273 aaPredicted RBP8.39□□□□□ -1.07
TMOD3-201ENST00000308580 OR4C13Q8NGP0 309 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 WDYHV1Q96HA8 205 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 EAF1Q96JC9 268 aaPredicted RBP8.39□□□□□ -1.07
TMOD3-201ENST00000308580 TGIF2-C20orf24A0A0A6YYL0 155 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 ZNF735P0CB33 412 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 FAM216BQ8N7L0 139 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 IGHV2OR16-5A0A0B4J2B6 119 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 A8MWL6 223 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 C8orf88P0DMB2 117 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 EGR1P18146 543 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 VN1R17PQ8TDU5 208 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 MARVELD3Q96A59 401 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 FBLN5Q9UBX5 448 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 MUC15Q8N387 334 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 M0R143 59 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 GFRA3O60609 400 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 C9orf106Q8NAJ2 232 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 H3BTX0 84 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 TMEM186Q96B77 213 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 RCC1LQ96I51 464 aaKnown RBP8.39□□□□□ -1.07
TMOD3-201ENST00000308580 PLSCR2Q9NRY7 297 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 MRPS18CQ9Y3D5 142 aaKnown RBP8.39□□□□□ -1.07
TMOD3-201ENST00000308580 RLFQ13129 1914 aa8.39□□□□□ -1.07
TMOD3-201ENST00000308580 PQLC2LA1A4F0 135 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 PINLYPA6NC86 204 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 CRYBB3P26998 211 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 CLEC2AQ6UVW9 174 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 BPIFA4PQ86YQ2 179 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 FAM106CPP0CH98 169 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 LOXL3P58215 753 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 UNQ5815/PRO19632Q6UWF5 114 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 NABP2Q9BQ15 211 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 PARLQ9H300 379 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 PNKDQ8N490 385 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 PSMG3Q9BT73 122 aaPredicted RBP8.38□□□□□ -1.07
TMOD3-201ENST00000308580 ANK1P16157 1881 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 CCL1P22362 96 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 HOXA4Q00056 320 aaPredicted RBP8.38□□□□□ -1.07
TMOD3-201ENST00000308580 SGK494Q96LW2 274 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 HEATR5BQ9P2D3 2071 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
TMOD3-201ENST00000308580 NTN3O00634 580 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms