RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 HAGHQ16775 308 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 PLAC9Q5JTB6 97 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 Q71RC1 249 aaPredicted RBP7.73□□□□□ -1.17
PTPRE-202ENST00000306042 MRPL30Q8TCC3 161 aaKnown RBP7.73□□□□□ -1.17
PTPRE-202ENST00000306042 DUX5Q96PT3 197 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 MARVELD1Q9BSK0 173 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 DOCK10Q96BY6 2186 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 CEP192Q8TEP8 1941 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 PLXNB3Q9ULL4 1909 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 MLNRO43193 412 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 HIST1H1BP16401 226 aaKnown RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 EFNB3Q15768 340 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 ZNF818PQ6ZRF7 136 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 TNFRSF14Q92956 283 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 KPTNQ9Y664 436 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 TRAV24A0A0B4J272 114 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 REG1AP05451 166 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 CD24P25063 80 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 OTX1P32242 354 aaPredicted RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 P2RY1P47900 373 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 C16orf82Q7Z2V1 217 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 C19orf12Q9NSK7 152 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 GPR132Q9UNW8 380 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 A0A1B0GVG6 124 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 YPEL1O60688 119 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 INHBBP09529 407 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 WNT2P09544 360 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 SPNP16150 400 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 TOR2AQ5JU69 321 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 SCARB1Q8WTV0 552 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 BSCL2Q96G97 398 aaPredicted RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 YPEL2Q96QA6 119 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 CHRDL1Q9BU40 450 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 RCC2Q9P258 522 aaKnown RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 CEP295Q9C0D2 2601 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 M0R1W7 72 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 BMPR1BO00238 502 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 NBR2O15453 112 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 CDC34P49427 236 aaPredicted RBP7.72□□□□□ -1.17
PTPRE-202ENST00000306042 SULT1A1P50225 295 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 DYNLT3P51808 116 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 ZNF146Q15072 292 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 ZNF497Q6ZNH5 498 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 ARPC1AQ92747 370 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 PPP1R3EQ9H7J1 279 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 BIN3Q9NQY0 253 aa7.72□□□□□ -1.17
PTPRE-202ENST00000306042 DOPEY2Q9Y3R5 2298 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 BCL2L11O43521 198 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 HLA-GP17693 338 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 EGR1P18146 543 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM200BQ69YZ2 307 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 CLDND2Q8NHS1 167 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 ZNF524Q96C55 264 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 REG4Q9BYZ8 158 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 TECRQ9NZ01 308 aaKnown RBP7.71□□□□□ -1.17
PTPRE-202ENST00000306042 TRAV30A0A087WSZ9 112 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 IGLV1-44P01699 117 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 ZNF79Q15937 498 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 FAM78BQ5VT40 261 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 OR10G4Q8NGN3 311 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 OR10G9Q8NGN4 311 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 OR10G7Q8NGN6 311 aa7.71□□□□□ -1.17
PTPRE-202ENST00000306042 IGHV2-26A0A0B4J1V2 119 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 IGHV1-8P0DP01 117 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 UCP3P55916 312 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 DEFB113Q30KQ7 82 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 HEPN1Q6WQI6 88 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 ANGPTL6Q8NI99 470 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
PTPRE-202ENST00000306042 TCF19Q9Y242 345 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 PIEZO2Q9H5I5 2752 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 OR2J3O76001 311 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 HTN1P15515 57 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 RND2P52198 227 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 B2MP61769 119 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 RELQ04864 619 aaPredicted RBP7.71□□□□□ -1.18
PTPRE-202ENST00000306042 KLRD1Q13241 179 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 CR1LQ2VPA4 569 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 SSX7Q7RTT5 188 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 PCNPQ8WW12 178 aaKnown RBP7.71□□□□□ -1.18
PTPRE-202ENST00000306042 RPUSD4Q96CM3 377 aaKnown RBP7.71□□□□□ -1.18
PTPRE-202ENST00000306042 HIGD1AQ9Y241 93 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 ATRXP46100 2492 aa7.71□□□□□ -1.18
PTPRE-202ENST00000306042 C5orf63A6NC05 138 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 H3BUX3 64 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 J3QRE1 110 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 NPFFO15130 113 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 HYPMO75409 117 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SMIM17P0DL12 118 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 CD37P11049 281 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
PTPRE-202ENST00000306042 EFNB1P98172 346 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 MORN2Q502X0 79 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 MINOS1Q5TGZ0 78 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 H1FOOQ8IZA3 346 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms